Microarray Probes on PGSC0003DMT400059171
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_42440_PI426222305 |
JHI_St_60k_v1 |
AAGGAATCCCCGTTCTCCGATGACATTCAGGGTTCTGATGCTACAGGAAATGATGTACAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400059171
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400059171 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G57180.2 |
+3 |
2e-63 |
219 |
189/436 (43%) |
chloroplast import apparatus 2 | chr5:23168393-23170763 FORWARD LENGTH=435 |
Transcript Sequence (2020 bp)
>PGSC0003DMT400059171 2020 pgsc_dm_v3.4
CCCCAATCTCTTCCAGTGAACTCTTTCAACAAATCTTAGCCTTTTATCTCCCCCCGTGAC
CCCTTTTTCTTTCTATCATACTTTAATTTTTTTTCATATTTTTTGTTATATTTATATATA
TGCCAAACCCCAAAACCCTTGTGAATTCCTTTATTTAAATACCCCTTTTCCCATTCTTTG
ATATTTCTCTTAAACATTTTCTTGAATTCAGTGCTTTCATCTTCTTGCCCAACTAAATTC
TCCCTTCTTCTTGTTTAAGGTTAGATTCTCTTGGGATTAGTTACTTCATTTGTCAAATTC
TTCTTATGTTTTTGGTAGGTTCTTGATACTGAAAAAGTGCTTGACTTTTTTATTTGATAA
ATTTTTAAATATATAATAATGTTTCGAAAAGTTTGGTTTATAGTGAGAAATGAGTAATGT
ATTTTTCCATTTTTTAGGGTTTTAGGGGTTTCTTTGTATTGCACTACTTACTTTTTTTCT
TTTTTTTTTTATAGTACCAAATGATGGGGTTTTCAAGAATTCATCATTGAATTTCAAGGA
TTGTTTCAATTCTTGAAATTTTGCTCTCTGTTTTTTTGCTCTGTTATTTTTTTTTTTTAT
ATAGTAGAAAAATGTCATCCTGTTTGGCTGGTGGTGGTAGAGCAGCTTATAAATTAGATT
TAGAGATTATAAAATCTCCATCTACCTCATGGACTTCCCAATCATCTTCACCTTCTTCAA
CATTATCCGAATCGAGCAATTCTCCCATTGCAATCTCTACTAGAAAACCTCGAACACCTC
GAAAAAGACCTAACCAAACCTACAATGAAGCTGCAGCTCTTTTATCAACAGTTTATCCCA
AAATTTTCTCATCAAAACACCTCACTAAGCCTTGCAAATTCACTAAACCACATTACCCCT
TTTCATATGAGTCCTCAGACTTGGTTGTCCCTTACCAAATCATCGAAAACTCGGGGTTTT
TACTCCATCCTCCATTGATTGAAAAACCCAATTGCGTAATTGAGCATAAGTCAGTCAGTT
CTTGTGAAAAACCATGCCAGAGTCCTGGGGAAATCGACTCTAAAGGGAGTAGTTCGTTAG
ATGTGTGTGAAGAATTTCAAGAAGATTTCGATGCTGAATCTATCTTAGATGAGGAAATTG
AAGAAGGTGTTATTGATAATATCATGGGAAAGTTAAGAGTTGAGAATGAGGTAAAGAATG
AGTCCATATTTAGTTATAGTTATAGTCATAGCAAGCGCCACCAGAATAATTCTGGTGGCA
CTTGCTATGGTTTTCCAATAGGATTAGGATTCGAAAATGGGTACCAACATTATGATTTTG
GTATAATGAGGGGTGGAGTGAGACCATTGAGAAATGTTGATGATGGTGATAATTGGTGGA
GGTATACTTCTAGTGTGAACGTTACCGACATTACTCCGAAATTTAGTAAACCTCCAATCG
AGAAAAAGAAAAAGAAAGTTGAGAGACTCGTGGAGTTGAGAGGGGCCGCGGAAACATCAT
CAGCTAAAGATAATTCGATTACAAAGAAGACGAATAAGGAGAATTCAAGTCAATTGATTA
AAGAAGAGGTAGTCGATGTTCCTAAACCAAATTCGGGGTTGTTACTAAAATTGAACTTCG
ATGATGTTTTGAATGCGTGGTCCGATAAGGAATCCCCGTTCTCCGATGACATTCAGGGTT
CTGATGCTACAGGAAATGATGTACAAGCTAGATTAGCACAAATAGACTTATTCTCAGATA
ATGGAGGAATTAGAGAGGCTAGTGTGTTACGTTACAAAGAAAAACGACGTACTCGTTTAT
TTTCTAAAAAAATTAGATACCAAGTTAGAAAAGTCAACGCGGATCGACGACCCAGAATGA
AGGTATTATTATTATGAAGAAAAATCAACTTATATACGTTGACAATGTAAGAGTTTTTTT
TAGACGATCACCTCTTATTGTTAGTTGTTTTCCTTAATTTTTTAGGTTATTTATTTCGTT
TATTATCAACATTATAATTTTTTGAGTAATCTGATAGTAA
