Microarray Probes on PGSC0003DMT400059007

Probe IDChipProbe Sequence
CUST_47220_PI426222305 JHI_St_60k_v1 TCCTAAGGTTAATCTGAGTAATCCCATTGGGAATCAAAGAAAGGAAAAGGGAAATATTGT

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400059007

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Source Transcript PGSC0003DMT400059007 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT2G23690.1 +1 1e-32 120 88/164 (54%) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37240.1); Has 243 Blast hits to 243 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 241; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr2:10072297-10072788 FORWARD LENGTH=163

Transcript Sequence (925 bp)

>PGSC0003DMT400059007 925 pgsc_dm_v3.4
ATCAACTAACCAAATCCATCAATAAATTGGAAAATGGGTATATGCAATTCATGTGAATCT
ACATCTGTTGCAACTGTGAAAATAATACTACAAGACGGAAGATTACAAGAGTTTTCTTAT
CCGATAAAAGCTTCGTATCTTTTACAAAAAGATCCTACTATTTTCATATGTAACTCCGAT
GAAATGGAATTTGGATATAAGATTTCCGCGATAAATGCAGAAGAAGAGCTTCAATTGGGT
CAATTGTATTTCGCTATGCCTTTGAAGAGACTAAGAAGTAGACTTCGGGCCGAAGAAATG
GCAGCATTAGCTGTGAAGGCGAGTTCTGCATTGAAGAGAACTAATAGTAATAAAGCGTTT
GTATTTCCTCAAGGAAAGAATTGTGATAGAGTGACAAGGAATGTGGTGGACGGTGGTGTT
AGTGGGAGGAGAAAGAAGAAGACGGCGAAGTTGAGTGTAATACCAGAATAGGGTGAAAAA
AATCATATTTGGATAACATTTTGTTATGCCGGGTAAAAGTTACCGCTGCAAAGAAGGGTG
AAATAGTTGAGATGCGGCATATGGGGACTGACCATTCAGTTATTGATCCAAATCAGGTAA
AGAATTGAAAGATATGTTTTGAAAAGATGAAAGTTGGAGCTATAGACCTTGAAAAATGTC
CAAATATACTTTCTGAACAATCTTAATTTCTCATATTCGAGTTGATCTTCGATTCACCCC
GGCCTAATCATTGCTATTGAAGCGAACTCCTAAGGTTAATCTGAGTAATCCCATTGGGAA
TCAAAGAAAGGAAAAGGGAAATATTGTAACGAAAATTAGACTTGCAGCCAATATGTGAAA
GATTTTCATTTATAATTACTACGCGTTGATGGTAAATCTTTAATTTTAACTACTGTTCAT
TTTATTTTATTTTGTAAATAGTGGG