Microarray Probes on PGSC0003DMT400049092
Probe ID | Chip | Probe Sequence |
---|
CUST_52483_PI426222305 |
JHI_St_60k_v1 |
TGAGTTTTTTCGTCAAACTCAGTCCGAGGAGATCTTTACAGGAATTGTGAGAGAAGTGCA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400049092
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400049092 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT5G47240.1 |
+1 |
2e-115 |
340 |
189/288 (66%) |
nudix hydrolase homolog 8 | chr5:19183806-19185467 FORWARD LENGTH=369 |
Transcript Sequence (873 bp)
>PGSC0003DMT400049092 873 pgsc_dm_v3.4
TATAAGATAAACGGTACAAACCATACAAGTTTGTATTTTCGAGATAAATGGGTGCTTGAT
GCCTCTGACGATGAATATGGAGGAGTACTCGTCAACGCAGAAAGACTACCATCTGATCCC
GACAAATTTACCTTTGTGCTTCGTGCATCTCTCTCTCATTGGAAAGTGAAGGGGAAGAAG
GGAGTTTGGCTTAAGCTACCACTAGAAAAATGTGATCTAGTTCCTGTTGCAGTAAAGGAA
GGATTTCAATACCATCATGCAGAAAGAGGATATGTTATGATGACTTATTGGATTCCGGAG
GAACCCTGTATGCTTCCTTCGAATGCATCACATCAAGTTGGAGTTGGGGGTTTTGTGATC
AACGATAAAAATGAGGTGCTTGTCGTGCAAGAGAAACATTTTACGCCGTCTCTTTCAGGC
CTATGGAAAATACCAACTGGTTTTATTCATGAGTTTTTTCGTCAAACTCAGTCCGAGGAG
ATCTTTACAGGAATTGTGAGAGAAGTGCAGGAGGAAACTGGCATTGATACTGAATTTGTG
GAGGTTATGGCTTTCAGGCATGTTCACGATGTGGCCTTTCAAAAGTCAGATTTGTTCTTC
GTTTGTCTGTTAAGACCCCTGTCAAAACAGATCATGGTTGATGATCTAGAAATTCAGGAT
GCTAAGTGGATGCCTCTAGTTGAGTTTGTGGAGCAACCTCTAATCCAAGAAGACGATATG
TTCAAGAAAATAATTGACATTTTTATCGCTAGACTAGGGAAGCGGTATTGCGGATTGTCT
GTCCATCAATTGGTTTCCAAATTTGATGACAAACTTTCTACATTGTACTTTAACACAGTT
GATGACCCAAATTTGAACTGTCAAGCCAGTTAG