Microarray Probes on PGSC0003DMT400048001
Probe ID | Chip | Probe Sequence |
---|
CUST_45890_PI426222305 |
JHI_St_60k_v1 |
GACACTGGTGTTAAAATTAGCTTCTTCAATCCTCAGTAACTAGTATGAACATGCGAAATT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400048001
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400048001 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G47670.1 |
+3 |
3e-81 |
256 |
110/207 (53%) |
Transmembrane amino acid transporter family protein | chr1:17536834-17539486 REVERSE LENGTH=519 |
Transcript Sequence (786 bp)
>PGSC0003DMT400048001 786 pgsc_dm_v3.4
ATTGATTGATGCAGGCGACAATGCCTTCGAGTGAGAAGCACCCATCGCAAGTGCCTATGT
GGAGGGGTGTGCAATTCGCATATCTACTCATAGCAATGTGCCTATTCCCTCTTGCAGTTG
GTGGCTACTGGGCTTATGGTCATTTGATTCCAGCAAACGGGAGTGTGTTAACGGCATTAT
TTGCATTCCATAGCCAAGATGTTTCGCGATCTGTATTAGCTTTAATAAGTATTTTTGTGA
TAATAAATGCGGTGAGCTCATTCCAACTGTACGGAATGCCAATGTTTGACGATATGGAAT
CAGCTTACACAACAAGGTGCAAAAAAGCATGCCCGTGGTGGCTCCGTTCGATATTCAGGG
CAATCTTCGGGTTCGTGTGCTTCTTCATTGCGGTGGCTCTTCCATTTTTGGGTAGCTTTA
CTGGGCTTATTGGAGGAATTGCTCTGCCTATTACATTTGCTCATCCATGTTTTATGTGGC
TTAAAGTGAAGAAGCCCAAAAAGTACTCTCTAAGTTGGTGGGTAAATTGGGGACTTGGGC
TTTTGGGAATGGCCTTAAGTGGGATTTTGATTGCTGCTGGTTTGTATGTGGTTATTGACA
CTGGTGTTAAAATTAGCTTCTTCAATCCTCAGTAACTAGTATGAACATGCGAAATTAATA
GTACTGAAAAGGTTGGTTTGAACAACAATTTAATTTATTGTTATCTTACTTTGAGTTGGT
AGATTTTATTGTACTTCTTTATGGAATTTCAAGGAATAAATTAGTAAAGAATTTCTTGAT
TCCAAA