Microarray Probes on PGSC0003DMT400039809
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_36249_PI426222305 |
JHI_St_60k_v1 |
CAAGAACTTGATGAGGCTTTACAGAGGGAGGTCCAAGATTGTTATGAACTTTCTGCCGAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400039809
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400039809 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G53310.1 |
+2 |
0.0 |
1676 |
850/967 (88%) |
phosphoenolpyruvate carboxylase 1 | chr1:19884261-19888070 REVERSE LENGTH=967 |
Transcript Sequence (3285 bp)
>PGSC0003DMT400039809 3285 pgsc_dm_v3.4
TAATTTGCAAAAAAAAAAAACAAAAAAAATTGATGATTTTTATGTTTATGTCTATTGCTG
CAGAGTGTTGACTGTTGAGTGAGAAATGACTACTAGGAATTTGGAGAAACTTGCATCAAT
TGATGCACAGTTGAGGCAATTGGTGCCTGCTAAAGTTTCTGAAGATGATAAACTTGTTGA
GTATGATGCTTTGCTTTTGGATAGGTTTCTTGATATTCTTCAAGATTTACATGGGGAGGA
TCTCAAAGAAACAGTCCAAGATTGTTATGAACTTTCTGCCGAGTATGAAGCCAAGCATGA
TCCGAAGAAGCTGGAGGAACTTGGCAATGTGTTGACAAGTTTGGACCCAGGGGATTCAAT
TGTTATTGCTAAAGCTTTCTCTCACATGCTTAACTTGGCCAATTTGGCTGAGGAGGTTCA
GATTGCCTACCGTAGGCGCCAAAAATTGAAGAAAAAGGGAGATTTTGGGGATGAGAGCAA
TGCAACAACTGAGTCAGATATTGAAGAAACTTTCAAGAAATTGGTGGGGGACTTGAAGAA
GTCCCCTCAAGAAGTTTTTGATGCTATCAAGAATCAGACTGTGGATCTGGTCCTAACAGC
TCATCCCACTCAATCTGTACGAAGATCATTGCTTCAAAAGCATGGAAGGATCCGTGACTG
CTTGGCTCAGTTGTATGCTAAAGACATTACCCCTGATGATAAACAAGAACTTGATGAGGC
TTTACAGAGGGAGATCCAAGCTGCGTTCCGAACTGATGAGATCCGAAGAACTCCTCCTAC
TCCACAAGATGAAATGAGAGCTGGAATGAGCTATTTCCATGAAACAATTTGGAAGGGTGT
ACCAAAGTTTCTGCGCCGTGTTGATACAGCTCTTAAAAACATAGGGATTAATGAACGAGT
TCCTTATAATGCTCCTCTTATTCAATTCTCCTCTTGGATGGGCGGTGATCGTGATGGTAA
TCCAAGAGTGACTCCTGAGGTCACAAGAGATGTTTGCTTATTGGCCAGAATGATGGCAGC
TAACTTGTACTATTCGCAAATAGAGGACCTCATGTTTGAGTTATCTATGTGGCGCTGCAA
TGAAGAGCTTCGTGTGCGAGCAGATGATCTCCAAAGGTCTTCAAGGAGAGATGAAAAACA
CTACATAGAATTTTGGAAGCAAGTTCCTCCAAATGAACCCTATCGTGTAATTCTTGGTGA
TGTGAGAGATAAGTTGTATCAGACACGCGAGCGTGCTCGCCAACTATTAGGCCATGGATA
CTCTGAAATTCCAGAGGAAGCAACTTATACTAATATTGAGCAGTTCTTGGAGCCTCTTGA
GCTCTGCTACAGATCTCTTTGTGCTTGTGGTGATCTCTCCATCGCGGATGGTAGCCTTCT
GGATTTCCTGAGACAAGTTTCTACGTTTGGACTTTCACTTGTGAGACTTGACATAAGACA
AGAGTCGGACCGCCATACTGATGTGCTTGATGCTATTACGCAACATTTGGAAATTGGTTC
ATATCGAGACTGGTCTGAAGAACGTAGACAAGAGTGGCTTCTGTCTGAACTCAGTGGCAA
GAGACCTTTATTTGGACCTGATCTTCCAAAAACTGAAGAAATTGCTGATGTTTTGGATAC
GTTCCATGTCATAGCCGAACTCCCAGCAGACTGCTTCGGGGCATACATCATCTCAATGGC
CACTGCACCATCTGATGTGCTTGCAGTAGAGCTTCTACAGCGTGAATGCCGAGTGAGGCA
ACCTTTACGAGTTGTTCCACTTTTTGAGAAGTTGGCTGATCTGGATGCTGCTCCTGCAGC
CGTTGCACGTCTTTTCTCAATTGAGTGGTACAGAAACCGGATTAATGGCAAGCAAGAAGT
GATGATTGGATACTCCGACTCTGGCAAGGATGCAGGTCGGCTATCAGCAGCCTGGCAGTT
GTATAAGGCTCAAGAGGAGCTTATACAAGTCGCCAAGGAGTTTGACGTGAAGCTAACCAT
GTTCCACGGTAGAGGTGGTACAGTGGGAAGAGGAGGTGGCCCCGCCCATCTTGCCATATT
GTCTCAACCACCCGAAACAATTCACGGATCTCTCCGTGTTACAGTTCAGGGTGAGGTTAT
TGAGCAGTCTTTTGGGGAAGAACACTTGTGTTTTAGGACACTCCAGCGTTTTACTGCTGC
TACACTTGAACATGGGATGCATCCACCAGTCTCTCCAAAACCAGAATGGCGTGCACTTAT
GGACGAAATTGCAGTTGTTGCTACAGAAAAGTATCGATCAATAGTTTTTAAGGAACCCCG
ATTTGTTGAGTATTTCCGCCTGGCCACACCCGAGTTAGAGTATGGTCGAATGAACATTGG
CAGCCGTCCATCAAAGCGTAAACCCAGCGGAGGCATAGAATCACTTAGAGCTATTCCGTG
GATCTTTGCTTGGACTCAAACTAGATTCCATCTTCCAGTCTGGCTCGGCTTTGGAGCAGC
ATTTAAGTATGCCATTGGAAAGGATATCAAAAACCTTCGCATGCTGCAGGAAATGTACAA
TGCATGGCCTTTCTTTAGGGTAACTATTGATTTGGTTGAGATGGTGTTCGCCAAAGGAGA
CCCAGGCATTGCTGCATTGTTCGACAAGCTTCTGGTGTCCGAAGATTTGTGGTCTTTCGG
TGAACTTTTGAGGTCAAAGTATGAGGAGACAAAGAGCCTCCTCCTGCAGATTGCTGGACA
CAAGGATCTTCTGGAGGGTGATCCATACTTAAAACAACGACTCAGGTTGCGTGACTCCTA
CATCACAACATTGAATGTGTGTCAAGCCTACACCCTAAAGCGTATTCGTGACCCAGACTA
TAGTGTCACACCAAGGCCTCACATTTCCAAGGAATACATGGAAGCAAAACCAGCTACAGA
ACTTGTGAACCTGAACCCGACTAGCGAATATGCACCTGGCTTGGAGGACACACTCATCTT
AACCATGAAAGGTATTGCTGCTGGAATGCAGAATACTGGTTAGTCGTCACCTGGAATATG
GAAGATGTTAGTCGTCAAAGATGTTGACGACTAACATCATGATTACATTCTTGGCGCAAA
GTCCCGAATAGGGACCATCATTGAGCAAACTTGCACAAACAGTGAACTAGAATCTTATGT
CCCTATTGTAACTGTAGTAACTCTTGAACACTAAGGATCCGTTTGGTTTGATGTGTTATT
AGATGAAATATTGATGGTATAAAATTTGGTATTTGCTTTATCCAGTGTCTCCTTTGTAAT
TTCAGACTTGCATAGGCATAATGTTAATACATTAGTGTATTATAG
