Microarray Probes on PGSC0003DMT400037143

Probe IDChipProbe Sequence
CUST_26468_PI426222305 JHI_St_60k_v1 GAAACTGCAGCTAGAAGAAGATGAATTTGACACACACACACACAAAATAAGCTAAATGCA

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400037143

Click here to view details at Spud DB Genome Browser (opens in new window)


Source Transcript PGSC0003DMT400037143 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT5G62040.1 +1 5e-82 249 120/169 (71%) PEBP (phosphatidylethanolamine-binding protein) family protein | chr5:24922810-24923709 FORWARD LENGTH=177

Transcript Sequence (906 bp)

>PGSC0003DMT400037143 906 pgsc_dm_v3.4
AAAAGACCTATATATAAAGCCTCCTCGTTTGCAACATTACCAAATCATTCACCACTTATA
TTTAATTTCTTCATCACTCAACATACAACATTTTCAAAAAAAGAAAACAGAAAAATGTCT
TCTAGAGGTACTTGTGAACCACTTGCAGTAGGGAGAGTAATAGGTGAAGTAGTAGACAGT
TTTAGTCCAAGTGTGAAAATGAAAGTTATATACAATGGGAGCAAACAAGTTTCTAATGGC
CATGAGATCATGCCTGCTGTTGTTGCAACTCAACCTCGTGTCGAAATTGGTGGTGAAGAC
ATGAGATCTGCTTATACACTCATCATGACGGACCCTGATGCTCCAAGTCCTAGTGATCCA
TACTTGAGGGAACATCTCCATTGGATTGTGACAGACATTCCCGGTACAACTGACATTTCT
TTTGGAAGGGAGATAGTGTGCTACGAGACACCAAAGCCGGTAATTGGGATACATCGTTAT
GTATTTTTGTTGTATAAACAAAGAGGAAGGCAAACAGTGAAAGCACCATCAACAAGGGAT
CAATTCAACACAAGGAGTTTTTCGGCGGAAAATGGATTGGGATCCCCTGTTGCTGCTGTT
TATTTCAATGCCCAGAGAGAAACTGCAGCTAGAAGAAGATGAATTTGACACACACACACA
CAAAATAAGCTAAATGCACTTTGCATAGTGAAACCACAGTACAGACAAAAGTATTACTAT
TAGTACAACGTCCCCCAGGGCCTCACTGATTGATTTAAGAGATTCAAGTGTCATTGTCAA
GCATATTATATAAGCTCATATTCAATAGTATTATATTATATGTATGGTGTTTGTCGTACT
CATTTGCTTATTTTCATAAATAAATAACATATGAAACATGTTACGTGGAGTATGGAGAGG
GTTGAG