Microarray Probes on PGSC0003DMT400037042

Probe IDChipProbe Sequence
CUST_26460_PI426222305 JHI_St_60k_v1 GGAAAATTGATTAATCTTAAAGATGGTTCTATTAGAACCGCCATTGATACAGGATGTGGG

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400037042

Click here to view details at Spud DB Genome Browser (opens in new window)


Source Transcript PGSC0003DMT400037042 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT2G45750.1 +3 0.0 870 415/627 (66%) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr2:18842655-18845343 FORWARD LENGTH=631

Transcript Sequence (2158 bp)

>PGSC0003DMT400037042 2158 pgsc_dm_v3.4
AAAATTCATCATATCCCTTCAAACCAGAGGACCATTTTTGCTCTGCCATGGCGGGTTCTA
ATCAAACCCCATACTATACTCCAACTTCCAAACCTTCACAACCTACACACCCTTTTTCTT
CTTGGAAAAGACTCAATCTTTACTATTCTTTAGCTGCCATCACTTTCCTCTGTTGTGCTT
GTTATTACGCCGGCCAATTACAACACACCACCACCACCGTTGGCCTTCACCTCTCTAACA
TTGCCTCTAGTTGCTTCTCTTCTCAAAACACAACTTCCCCTGTTTTTTCATCTTCCCCTG
TTTCATCTTCCCAATTGGATTTCACTACTCACCATTCCGCTGGCGATGGCGATGGAGGAG
CTGTGGTTCCAGATGACACAGTCAAGATTTACCCCCCATGTGACGTTAAGTACAGTGAGT
ATACTCCATGTGAAGACCCCGCAAGGTCGTTAAAGTATAACAGAGACAGATTGATATACA
GAGAAAGACATTGTCCAGAAAAGAGTGAATTCTTGAAATGCCGTATACCGGCGCCGTACG
GTTACAAGAATCCGTTCAAGTGGCCAATGAGTAGGGATCTGGCGTGGTATGCTAACGTGC
CCCATAAAGAATTGACGGTGGAGAAAGCGGTTCAGAACTGGATTCGATTTGAAGGTGACC
GGTTTAGATTTCCCGGTGGTGGTACTATGTTCCCTAATGGTGCTGATGCATATATTGATG
ATATTGGAAAATTGATTAATCTTAAAGATGGTTCTATTAGAACCGCCATTGATACAGGAT
GTGGGGTGGCGAGTTGGGGAGCGTACCTTTTGTCAAGGAATATCCTAGCTATATCATTTG
CACCTAGAGATACACATGAAGCACAGGTTCAATTTGCTCTTGAGCGTGGAGTTCCTGCTT
TGATTGGAGTTATTGCTTCCAAGAGACTCCCTTATCCCTCTAGAGCTTTTGATATGGCTC
ATTGCTCTCGTTGCCTCATTCCTTGGGGCGAATATGATGGTACGTACTTGATTGAAGTTG
ACAGAGTCCTAAGGCCTGGTGGATATTGGATTCTTTCCGGTCCACCAATTCATTGGAGGA
AATACTGGAAAGGCTGGGAAAGAACGAAAGAAGACCTAAATGCTGAACAAACAAAAATTG
AGAAAGTGGCTAGGAGCTTGTGCTGGAAAAAGTTTGTTGAGAAGGATGACATTGCTATAT
GGCAGAAGCCATACAATCATTTACAATGCAAGGAATTGCGAAAGACGTCAAAAAATCCAC
CAATGTGTCCTGCTCAAGATCCTGATAGAGCCTGGTACACAGAGATTGAAACATGTTTAA
CTTCCTTGCCTGAAGTTTCGAGTGAAGAAAAGGTAGCTGGTGGACAGTTGGAAAAATGGC
CTAAAAGATTACACGCGATACCACCAAGGATTAGCAGAGGAACTCTAAATGGGGTCACAT
CGGACACTTTCAACAAGGACTCACAGCTATGGAAACGAAGAGTTTCGTACTACAAGACAG
TGAATAATCAACTTGGCCAACCGGGGAGATACCGAAATCTATTAGATATGAATGCCTACT
TGGGTGGTTTTGCTGCCAATTTGGTTGATGATCCTGTTTGGGTCATGAACATAGTTCCTG
CTGAAGCTAATGTTAACACGCTTGGTGTTATCTATGAACGAGGATTAATTGGAACATACC
AGAGCTGGTGTGAGGCTATGTCAACTTACCCAAGAACATATGATCTTATTCATGCTGACT
CTGTATTTACTCTCTATAAAGACAGATGTGAAATGGAGGATATATTACTTGAGATGGACA
GAATATTAAGGCCAGAAGGAAGTGTAATAATTAGAGATGATGTAGATACATTGATCAAAG
TAAAGAGGATAACAGATGGACTGAACTGGGATAGCCAAATAGTGGATCATGAAGATGGAC
CATTGGAGAGGGAAAAACTTCTCTTTGCAGTAAAGTCATATTGGACAGCTCCATCTATCC
AAGAATCTTAAAAAGTCCCTACTAGATATTTTTATTTTTTTTGAAAAAAACTTTTATAGA
TTTCTTCATATGATTCCTCTGTCTTTTTCATCTTTTTACAATTGTGATATATTAAGTTCA
TATGATTCTTTAGCTACTTCAGTCTCTTGACTGACATGAATGAATGAATGCAGTGGAG