Microarray Probes on PGSC0003DMT400037042
Probe ID | Chip | Probe Sequence |
---|
CUST_26460_PI426222305 |
JHI_St_60k_v1 |
GGAAAATTGATTAATCTTAAAGATGGTTCTATTAGAACCGCCATTGATACAGGATGTGGG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400037042
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400037042 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT2G45750.1 |
+3 |
0.0 |
870 |
415/627 (66%) |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr2:18842655-18845343 FORWARD LENGTH=631 |
Transcript Sequence (2158 bp)
>PGSC0003DMT400037042 2158 pgsc_dm_v3.4
AAAATTCATCATATCCCTTCAAACCAGAGGACCATTTTTGCTCTGCCATGGCGGGTTCTA
ATCAAACCCCATACTATACTCCAACTTCCAAACCTTCACAACCTACACACCCTTTTTCTT
CTTGGAAAAGACTCAATCTTTACTATTCTTTAGCTGCCATCACTTTCCTCTGTTGTGCTT
GTTATTACGCCGGCCAATTACAACACACCACCACCACCGTTGGCCTTCACCTCTCTAACA
TTGCCTCTAGTTGCTTCTCTTCTCAAAACACAACTTCCCCTGTTTTTTCATCTTCCCCTG
TTTCATCTTCCCAATTGGATTTCACTACTCACCATTCCGCTGGCGATGGCGATGGAGGAG
CTGTGGTTCCAGATGACACAGTCAAGATTTACCCCCCATGTGACGTTAAGTACAGTGAGT
ATACTCCATGTGAAGACCCCGCAAGGTCGTTAAAGTATAACAGAGACAGATTGATATACA
GAGAAAGACATTGTCCAGAAAAGAGTGAATTCTTGAAATGCCGTATACCGGCGCCGTACG
GTTACAAGAATCCGTTCAAGTGGCCAATGAGTAGGGATCTGGCGTGGTATGCTAACGTGC
CCCATAAAGAATTGACGGTGGAGAAAGCGGTTCAGAACTGGATTCGATTTGAAGGTGACC
GGTTTAGATTTCCCGGTGGTGGTACTATGTTCCCTAATGGTGCTGATGCATATATTGATG
ATATTGGAAAATTGATTAATCTTAAAGATGGTTCTATTAGAACCGCCATTGATACAGGAT
GTGGGGTGGCGAGTTGGGGAGCGTACCTTTTGTCAAGGAATATCCTAGCTATATCATTTG
CACCTAGAGATACACATGAAGCACAGGTTCAATTTGCTCTTGAGCGTGGAGTTCCTGCTT
TGATTGGAGTTATTGCTTCCAAGAGACTCCCTTATCCCTCTAGAGCTTTTGATATGGCTC
ATTGCTCTCGTTGCCTCATTCCTTGGGGCGAATATGATGGTACGTACTTGATTGAAGTTG
ACAGAGTCCTAAGGCCTGGTGGATATTGGATTCTTTCCGGTCCACCAATTCATTGGAGGA
AATACTGGAAAGGCTGGGAAAGAACGAAAGAAGACCTAAATGCTGAACAAACAAAAATTG
AGAAAGTGGCTAGGAGCTTGTGCTGGAAAAAGTTTGTTGAGAAGGATGACATTGCTATAT
GGCAGAAGCCATACAATCATTTACAATGCAAGGAATTGCGAAAGACGTCAAAAAATCCAC
CAATGTGTCCTGCTCAAGATCCTGATAGAGCCTGGTACACAGAGATTGAAACATGTTTAA
CTTCCTTGCCTGAAGTTTCGAGTGAAGAAAAGGTAGCTGGTGGACAGTTGGAAAAATGGC
CTAAAAGATTACACGCGATACCACCAAGGATTAGCAGAGGAACTCTAAATGGGGTCACAT
CGGACACTTTCAACAAGGACTCACAGCTATGGAAACGAAGAGTTTCGTACTACAAGACAG
TGAATAATCAACTTGGCCAACCGGGGAGATACCGAAATCTATTAGATATGAATGCCTACT
TGGGTGGTTTTGCTGCCAATTTGGTTGATGATCCTGTTTGGGTCATGAACATAGTTCCTG
CTGAAGCTAATGTTAACACGCTTGGTGTTATCTATGAACGAGGATTAATTGGAACATACC
AGAGCTGGTGTGAGGCTATGTCAACTTACCCAAGAACATATGATCTTATTCATGCTGACT
CTGTATTTACTCTCTATAAAGACAGATGTGAAATGGAGGATATATTACTTGAGATGGACA
GAATATTAAGGCCAGAAGGAAGTGTAATAATTAGAGATGATGTAGATACATTGATCAAAG
TAAAGAGGATAACAGATGGACTGAACTGGGATAGCCAAATAGTGGATCATGAAGATGGAC
CATTGGAGAGGGAAAAACTTCTCTTTGCAGTAAAGTCATATTGGACAGCTCCATCTATCC
AAGAATCTTAAAAAGTCCCTACTAGATATTTTTATTTTTTTTGAAAAAAACTTTTATAGA
TTTCTTCATATGATTCCTCTGTCTTTTTCATCTTTTTACAATTGTGATATATTAAGTTCA
TATGATTCTTTAGCTACTTCAGTCTCTTGACTGACATGAATGAATGAATGCAGTGGAG