Microarray Probes on PGSC0003DMT400035541
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_44206_PI426222305 |
JHI_St_60k_v1 |
ATTCATGGGATATTGAGGATGAGAATGCTGAGCAGCTTATTATTGAGGAAGATAGCCGCC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400035541
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400035541 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G76490.1 |
+1 |
1e-41 |
150 |
85/183 (46%) |
hydroxy methylglutaryl CoA reductase 1 | chr1:28695801-28698206 FORWARD LENGTH=642 |
Transcript Sequence (648 bp)
>PGSC0003DMT400035541 648 pgsc_dm_v3.4
ATGGACGTTCGCCGGCGACCTGTTAAGCCTCTATACACATCTAAAGATGCTTCCGCCGGC
GAACCTCTGAAACAAGAAGTTTCTTCTCCTAAAGCATCTGATGCGCTTCCACTCCCATTG
TACCTAACCACTGGGTTGTTTTTCACCATGTTTTTCTCTGTTATGTATTTTCTTCTCGTA
AGGTGGCGTGAGAAGATCCGTAATTCTATTCCTCTTCATGTGGTTACCCTTTCTGAATTG
TTAGCTATGGTGTCATTGATTGCTTCCGTTATATATCTTTTGGGTTTCTTTGGGATTGGG
TTTGTTCAGTCGTTTGTGTCCAGGTCGAATAGTGATTCATGGGATATTGAGGATGAGAAT
GCTGAGCAGCTTATTATTGAGGAAGATAGCCGCCGTGGACCATGTGCTGCTGCCACTACT
CTTGGCTGCGTTGTGCCTCCACCACCTGTTCGAAAAATTGCCCCAATGGTTCCACAGCAA
CCTGCTAAGGTAGCTTTGTCCCAAACGGAGAAGCCTTCGCCAATAATTATGCCACCATGT
GCTGCTGCCACTACTCTTGGCTGCGTTGTGCCTCCACCACCTGTTCGAAAAATTGCCCCA
AACGGAGAAGCCTGCGCCAATAATTATGCCCGCATTATCGGAAGATGA
