Microarray Probes on PGSC0003DMT400031782
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_10880_PI426222305 |
JHI_St_60k_v1 |
GCTCGTAATGATGAAGTTGGTCTTGAGATTCCGAAAACTTCATCATCAACATTGTTTAAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400031782
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400031782 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G63820.1 |
+1 |
4e-47 |
161 |
88/156 (56%) |
CCT motif family protein | chr1:23682529-23684050 REVERSE LENGTH=293 |
Transcript Sequence (789 bp)
>PGSC0003DMT400031782 789 pgsc_dm_v3.4
ATGCCTACCAACTGTTTGATACAAGAACTTCCCGAAACCAAAATTGATGAAACAACTTCA
TTTGACCAAATCACTTCGACCCTTCTTTCATCTTCACCTCCAAGTCATCAATTTGAGAAT
CTTTCACTTTGTCCAATTGGAAATCCAAATTTTGAATTTGGTGATTACTCTGTAAAAGCA
GAGGAATTTCAGGTCCATTTTGAATCTGATCATTTTGGTGCTTTTCAAAATGATGTGAAA
TTGATGCAGAGGAGTTTTAGTAGTAATTGTTTTGATAATAATAATAATAATAATAATGAG
AAACAAAGTTTCTCTATTTTTACACCAAACTTTGATAGTTTAATTGAGTCTACAAATTTT
CAAACATCAGCAGCAGTTAGTTCACCTGAAAACAGCTTTTCTTCTGGCCAAATGAGAAGA
GTTTGCAGCACTGGTGATTTGCAAAAGATGAAGACAAGTCAAACAAGGAACACTTTATCA
ACAAGTCCATTATCAGGAGAAAGAACATTTATTGAAGAAGCATCAAATATCAAAGTGGGA
AGATATACTGCAGAAGAGAGAAAAGAAAGAATTCATAGATACAGAGCAAAAAGAACTCAA
AGAAATTTTAACAAAACAATTAAGTATGCATGTCGAAAAACACTAGCGGACAATCGTCCA
AGGGTTCGTGGCAGATTTGCTCGTAATGATGAAGTTGGTCTTGAGATTCCGAAAACTTCA
TCATCAACATTGTTTAATCGATATGAAGATGAAGATGATATTTGGGTAAATATAATTATT
CTCTCTTAA
