Microarray Probes on PGSC0003DMT400023394
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_22294_PI426222305 |
JHI_St_60k_v1 |
TTTGTTGTTCTTCTGTCAGCTGAGATTATTGATAGCCCTTATTTGTCTTCCATAATCAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400023394
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400023394 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G22910.1 |
+1 |
1e-76 |
253 |
127/190 (67%) |
N-acetyl-l-glutamate synthase 1 | chr2:9749988-9752737 FORWARD LENGTH=609 |
Transcript Sequence (1343 bp)
>PGSC0003DMT400023394 1343 pgsc_dm_v3.4
CATTCCTCTCCCCATCCATTACTCAACCACCACAAAATTAGGCCATTGCAATTAATTCTC
TCCTTCTAAAATCATTCATTTACTCAAGAATCTGTCATTTTAATTTCACCTCTTTTTTCT
AGTTTTTTACATAATTTTCGTAGAAAAAGACAAGCAATTACTGATCTATAAGTGTTTTGA
AGCTATGGAACTAAGTGCCATTAGGAAACATAAACACGTTGTGAAGATTTGTCAATTAAG
TTGTCTTCTCTTTACTTCTACCGTTTAATATCCTATCTGCGTTTGTGTTTATAGCACTAC
AAGAAAAAAGTTCTTTAGCGAGCTGATTATTAATTAGTTGATTTTCTCAATTGTTTCATG
GCGATGTTGAAATTGAATCGTGGTTGGAATTTGGGAATGGGGAAAAAGTTCGATTTTGGT
ACTCGTGGAGAAGGAGGGAGTGGATTTTTGAGAATTCGAAGAGATGATGAGAAACAGGGG
ATTTGTTTGAATTGCTGCAGCGGTGTTGAAAATGGTAGAACGATTACTATGAGTGATACT
GATTACTTTTATAGTTCCATAGCATCAGTGACTGATTCAACGACTCAAACTGATAATGAC
GAAGGAGAGGAATTTGTGAGGATGATGAGGGAAGCTCAGCCTTATTTTCTTGCGCATAGG
GATCGAACATTTGTTGTTCTTCTGTCAGCTGAGATTATTGATAGCCCTTATTTGTCTTCC
ATAATCAAGGATATCTCGCTCCTTCATGGCCTGGGAATCAAGTTTGTTCTTGTACCTGGA
ACTCATGTCCAAATTGATAGGTTTCTGGCTGAAAGAGGAAGTGAGCCCAAGTATGTAGGC
CGCTACAGAGTAACAGACCCTGATTCACTGATGGCTGCAATGGATGCAGCTGGGAGAATT
CGTCTTATGATAGAGGCAAAGTTGTCTCCTGGGCCATCATTGACTGGTGTCCGCCGGCAT
GGAGAAAATAGTCGCTGGCATGATGGTGTTAGTGTTGCTAGTGGTAATTTTCTAGCAATG
AAGAGAAGAGGAGTTGTAGAAGGAATTGATTATGCAGCGACTGGTGAAGTAAAGAAGATA
GACGTTTCTCGCATTCGTGAGAGACTTGATCAGGATAGCATTGTGTTGTTAAGCAATCTT
GGATATTCCAGCTCTGGAGAAGTTTTGAACTGCAAGTATGCTTTATGGCTTTTGATAGGT
ATCTTTGTTGATGTTATGCATCATTAGTCCTGCATCTTGTTCTACGCAAATCGTTAAAAT
CAATGAATAAACAGAATTTCAGGAAGCTATATACTAGAGCATAGTGATACATAAGACTTC
AGCTTAGTAGTGATCAATTTTCC
