Microarray Probes on PGSC0003DMT400017804
Probe ID | Chip | Probe Sequence |
---|
CUST_33392_PI426222305 |
JHI_St_60k_v1 |
GTGGTCCTTCAAATATTGATGAAGATGATGAAAACTACCACCTACTACATTAAGCTCATA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400017804
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400017804 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT5G14570.1 |
+3 |
0.0 |
572 |
293/460 (64%) |
high affinity nitrate transporter 2.7 | chr5:4695331-4696890 REVERSE LENGTH=493 |
Transcript Sequence (1717 bp)
>PGSC0003DMT400017804 1717 pgsc_dm_v3.4
CGATAACGGGTCTCAAGTTTAAAAGGTGGTGCTTGGAAGCTCTGTTTTCTCATCAATCTA
CTCACGTTAACCTTCACTATAAATATAGTACTTGCTCAAGCTTTCCAAATTCAATTCACT
CTATAGCCATGGAAGAAGAGAAATCACAGTCCAAAATCGATCATTCTCTTAATAATTTCT
CCATAGCCGTAGATTATGATCACAAAGCCACAGAATTCCGCCCATTTTCATTATCTTCAC
CTCACATGAGAGCTTTCCATCTCGCATGGCTCTCTCTATTTTCCTGTTTCTTCTCTACTT
TCGCAATCCCTCCACTTCTCGAAGTTATTCGTAAGGACCTCAATCTCACCCAAACCGACA
TCGGCACAGCCGGAATCGCCTCCTTCATCGGTTCCATTTTCTCCCGCCTTGCGATGGGAC
CTGCCTGTGACGTGTTCGGTCCACGTGTTGCCTCCGCCACCCTGTCACTCCTCACTGCTC
CGGTAGTCCTCTCGACTTCTCTAATCTCCTCTGCGAAAAGCTTCATATTAGTTCGATTCC
TTATCGGATTTAGCTTGGCTAATTTCGTAGCGAGTCAATTTTGGATGAGCTCTATGTTCT
CCGGATGTACTGTTGGGCTTGCTAATGGATTCGCTGCCGGTTGGGCAAATGTTGGCTCTG
GCGTGACTCAATTAGTCATGCCGCTCGTATATACTCTGTTCACTACGTGCTTTAACATTC
CTTCGTTCATTTCATGGCGTATTGCGTTTATTTTCCCAGCGATATTTCAAGCGGCGACAG
CGATTTTGGTACTCGTGTACGGCCAGGACTTGCCTGATGGGAACTACAAACGTAAAATTA
CAAATAATCAAAGTGAAAATTTCTGCAGCCTACTTTTTAATGGGCTGAAGAATTACAGGG
GATGGATATTGGGATTGACGTATGGATTTTGTTTCGGAGTTGAATTGACTACCGATAATA
TAATAGCAGCGTATTTTTACGATCGGTTTCATGTGAATATTGAAATGGCAGGGGGTATTG
CAGCAAGCTTTGGGCTAGCGAATTGTGTGTCGAGGCCTGTGGGAGGGATAATTTCTGATA
AAATGGGGAAGAGATTTGGGATGAGAGGGCGGTTATGGAGTTTGTGGGCGGTGCAGACGG
TGGCTGGATTGATGTGCGTGCTGCTTGGCCGAGTGAATACAGTTTGGGCGTCTGTTCTGG
TTATGGCGTGCTTTTCGTTGTTTGTTCAAGCTGCTTCAGGACTCACATTTGGCATTGTGC
CATTCGTATCCAAAAGGTCGTTAGGTGTAATATCAGGCATGACAGGAAGCGGTGGGACTT
TAGGCGCAGTTATAACACAACTCCTGCTATTTTCAGGTTCCACCAAATTCTCAACTCAAA
CAAGCATATCAATTATGGGCTTAATGATGATTGTCTTTACACTTCCTATTACACTTGTCT
ACTTCCCCAAGTGGGGAGGAATGTTTTGTGGTCCTTCAAATATTGATGAAGATGATGAAA
ACTACCACCTACTACATTAAGCTCATATTGGATCCAAAAATATATATTGAGTACTAAAGT
ATATATGAATAGTAAGTTAAATATAGGAATATGTATATATAGCTATGAGTTTAAAATAGC
AATTTGTATGTATTATGTTATTTTTATATTATTAGTTATTGATAATGTCGGTGTGTGGAG
TGTTTATAATACAATTTAAGAGAGCCTATAATTTCTG