Microarray Probes on PGSC0003DMT400016882
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_51280_PI426222305 |
JHI_St_60k_v1 |
TGGATTTTAATTGATCTAATTCATACCCATGGGAACTTTACCGCACATTTATTGGTTCTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400016882
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400016882 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G28550.3 |
+1 |
3e-59 |
203 |
123/254 (48%) |
related to AP2.7 | chr2:12226168-12228251 REVERSE LENGTH=464 |
Transcript Sequence (1303 bp)
>PGSC0003DMT400016882 1303 pgsc_dm_v3.4
AAACAAGTATATTTGGGTATGGATATAGCTATTTTAACTATACAGTTTGCTTAATTTCGT
TGTTTCTGTGGATTTTGGTGCTAAAGCTGTGTCTATACTTTTTGCTAATTTTTGATTGGT
TTTTGTTGCTGCTTTATATTAGGTGGTTTTGATACTGCTCACACAGCAGCAAGAGCTTAT
GACAGAGCTGCAATTAAGTTCAGGGGTGTTGATGCTGATATCAACTTTAGCTTAAGTGAT
TACGAGGAGGATATGCAACAGATGAAAAACCTTGGTAAAGAAGAATTTGTGCACTTGCTG
CGACGCCATAGCACTGGTTTCTCAAGAGGGAGCTCCAAATTCAGAGGAGTGACGCTACAT
AAATGTGGTAGATGGGAGGCTCGGATGGGACAGTTCCTCGGGAAAAAGGCTTACGATAAA
GCGGCAATTAAAACTAGCGGAAGGGAGGCTGTTACCAACTTTGAGCCAAGTACCTATGAA
GGGGAAACAATGTCTTTACCACAGAGTGAAGGTAGCCAACATGATCTTGATCTGAACTTG
AGGATATCAACCACTTCTTCAAAGGAAAATGATAGGTTGGGAGGTTCTCGCTATCATCCT
TATGATATGCAAGACGCAACCAAACCTAAGATGGATAAACCTGGTTCAGTAATAGTTGGA
AGTTCACATCTCAAGGGACTACCAATGATGTCCCAACAAGCTCAATTGTGGACTGGAATC
TATTCTAATTTCTCTTCCAGCTTTGAGGGAAGAGCATATGACAAGAGAAAGGATACAGTT
TCATCACAAGGACCTCCAAATTGGGCATTGCAAATGCCCAGTCAGGTTGATACGACCAAC
CCATTGACAATGTTCTGCACGGCAGCATCATCAGGATTCTTCATTCCATCTACTACTTCT
ATCACTTCATCAGCATCTGCATTAGCAACTTCAACAAATGCCTCACAGTGCTTTTATCAG
ATCAACCCCCGCCTACCACCTCCATAACATGTTTTCTTCCATAACTAGTAATATAGGTAT
AAACATAGTCATTGATTTCTTTTGTAAGAAATAAATGACATTTTTGTGGATTGGATAATT
TTTAGAACTGCTTCTGAATCTGATGGGCAAAGATTCAAACTCCCATTGCAGATTGACTAT
AGTATTTGTGCTATCCTTGCTTATCGTACTGCTACATTGGTGCAAAATGGCATTCTTCCG
TCTCCTTTAATAATTGAATATTGTGGGGAATCTAAAGTCCTGTTGGATTTTAATTGATCT
AATTCATACCCATGGGAACTTTACCGCACATTTATTGGTTCTG
