Microarray Probes on PGSC0003DMT400015953
Probe ID | Chip | Probe Sequence |
---|
CUST_27863_PI426222305 |
JHI_St_60k_v1 |
CAACAAGCTTACATGAACTACTAGCTGACTTTCAATTGCTGCTTTTTCCTCTTCTTAATA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400015953
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400015953 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT3G05640.1 |
+1 |
2e-20 |
87 |
39/56 (70%) |
Protein phosphatase 2C family protein | chr3:1640610-1642227 REVERSE LENGTH=358 |
Transcript Sequence (573 bp)
>PGSC0003DMT400015953 573 pgsc_dm_v3.4
CCATACAAGTGTCATGTATGTTAAAGACCGCGTGCAAGGCCAAAAGTTTGTCTTTATTTC
TCAAACTTGAAAATAAGTCAATTCATTGTTGATATTGGTTAGGTTTGGGATGTGATGTCA
AATGAAGAAGCAGTGGAGATAGTATTTTCAACTGAAGAAAGGGAAGATGCAGCTAAGAGG
CTGGTGGAAAGTGCTATTTGTGCGTGGAAACGCAAACGAAGGGGCGTTCCCATGGATGAT
ATCTCAGCAATATGCCTCTTCTTTCATAACATTCCTCCTTCAAAACAACAAGCTAAGAAT
GTCTAAAATTCAACAACAAGCTTACATGAACTACTAGCTGACTTTCAATTGCTGCTTTTT
CCTCTTCTTAATATTTTTTTCAGTACTTGATGGTTTGTACATAAGTTCATACATACATAT
ATAGGCTCTTCATGTTTGCTATTATATTTCAATCAGGCATTGAAATGAAATATATTGAAA
ATCAAATCAGCTTCAAAGTTGAGGAATATGCTTAATATCTGTTTTCCAGAGATATTGTCA
ATATTATGGTGCAAACTTTAAAATGCAAAAAAG