Microarray Probes on PGSC0003DMT400008750
Probe ID | Chip | Probe Sequence |
---|
CUST_9722_PI426222305 |
JHI_St_60k_v1 |
ATCATTGTCTTAGTTACCGGTACATACACATCCATGGAGGAAATAATACACCTCATGTAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400008750
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400008750 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT3G28960.1 |
+1 |
4e-139 |
405 |
201/352 (57%) |
Transmembrane amino acid transporter family protein | chr3:10984245-10985767 REVERSE LENGTH=405 |
Transcript Sequence (1071 bp)
>PGSC0003DMT400008750 1071 pgsc_dm_v3.4
ATGATACTTCTTCTTCTAATTGCATGTGTAACTTTCTACACATCCTTATTAATAAAGAGA
TGTATGGATTTTGATCCAACTATTACAAGTTATCCCGACATTGGAGATCGTGCATTTGGA
ACAAGAGGAAGAATATTGGTTTCAGTTTTTATGAATCTAGAACTTTACATGGTTGCAACT
GGTTTTCTAATTCTTTCAGGGGACAACTTGCATAATCTGTTACCAGATGTGAACTTTGAG
TTTTGGGGACTCCAATTTGGTGGAAAACAAAGTTTTGTCTTGATTGTTGCTCTCCTCATA
TTGCCAACCGTATTGTTAAAGAACATGAGCATTCTTGCGTATGTATCAGCCTCTGCAGTA
TTAGCTACTCTCGTGATTATTGGTTTGATTTTCTGGGAAGCAACGTATGATGGCATTGGA
TTTCATAAAAGTGGAGTAGTTGTGAATTGGGGAGGAATCCCTACATCGTTTAGCTTATAT
GCCTTCTGTTATTGTGCCCATCCTGTTTTTCCAACTCTCTACACTTCAATGAAAAACCAA
AACCAATTTTCTAAGGTAATGCTTGTGTGTTTTGTGTTCTCTACCGTAACCTATGCATCA
ATAGCAATTATGGGATACTTAATGTTCGGCTCTGATCTGGAATCACAAATCACATTGAAC
CTTCAACCGGAAAAATTTAGCTCAAAATTGGCTATATACACAGCTTTGATCAATCCAATA
GCCAAGTATGCATTAATGATGACACTAATTATTAACAGACTTGAGGAGCGTTTGCAGTCA
TATTGTGACAAAAAATCATTTAGCTACCTGAACAGGACTATATTAATGATAAGCAGTGTC
ACTGTGGCTCTAACTATACCCTTTTTTGGGTATCTCATGTCACTAGTTGGAGCATTTCTT
AGTGTCACAACTTCAATTTTGGTACCATGTTTCTGCTACTTGAAGATTTTGGGCACTCAT
AAGAAACTTGGATATGAGCTAGTCATAATAGGATTTATAATTATAATGGGGATCATTGTC
TTAGTTACCGGTACATACACATCCATGGAGGAAATAATACACCTCATGTAA