Microarray Probes on PGSC0003DMT400006725
Probe ID | Chip | Probe Sequence |
---|
CUST_9540_PI426222305 |
JHI_St_60k_v1 |
TTTGTATTGGCCACTTAACATCTTATGTGTAATTCTGACCCATTGGGTCAGCACGGGCCA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400006725
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400006725 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G79750.1 |
+2 |
1e-111 |
343 |
197/251 (78%) |
NADP-malic enzyme 4 | chr1:30007655-30011179 REVERSE LENGTH=646 |
Transcript Sequence (1124 bp)
>PGSC0003DMT400006725 1124 pgsc_dm_v3.4
CAAAGTTGTACTTGGAATTTCTCAACGCCTTCCTCCTTTAAGGCCTTAGCAGTTTAAGAG
CTGGATTTGATCATATATTAGTTTCCCTTCCATTGTATATCTCTGTAGATTTCCGTTATG
CCCCTTAAATCACTTATTGACAATGCAGGCTGGTACCGGGATAGCAGAACTCATAGCTCT
TGAGATGTCAAAGCAGACTGGAGCCCCTCTAGAAGAGACACGAAAGAGAACCTGGATGGT
GGATTCTAAGGGGTTGATAGTTAGGTCTCGTATGGAGTCACTTCAACATTTTAAGAGGCC
CTGGGCTCATGACCACGAGCCAGTAAAAGAACTGGTGAATGCTGTGAAGTTAATTAAGCC
AACCGTCTTGATTGGGTCTTCTGGCACTGGGAAGACGTTTACTAAAGAAGTGGTACAAGC
TATGGCAACCTTCAATAAGAAACCAGTTATTTTTGCTCTCTCCAACCCAACATCACAGTC
TGAATGTACTGCTGAAGAGGCTTATACATGGAGTGAAGGGCGGGCCATTTTTGCTAGCGG
GAGTCCATTTGCTCCAGTTGAGTACAAGGGGAAAGTTTTCGTGTCTGGTCAGGGAAATAA
TGCATACATCTTCCCTGGTTTGGGTCTGGGACTTATAATATCTGGTGCTATTCGTGTTCA
TGATGACATGCTCCTGGCAGCCTCGGAAGCTTTAGCAGCAGAAGTAAGTCAAGAGAACTT
GGAGAAGGGACTAATATACCCACCATTTGCCAACATAAGGAAGATTTCAGCTCACATTGC
TGCCAAAGTAGCTGCCAAAGCATATGAGCTCGGCTTGGCCACTCGTCTACCTCAACCGGA
GAACCTAGTAACATATGCTGAGAGTTGCATGTACAGTCCAAGTTATCGTAGCTATCGCTA
AGTCAAGGAAGATACATAAAATTAGTAGTCATTGATTTTCATAGCTTTGAAGATTAGTGT
ACTCATGGAGATGGTACTAATTTAGGAATATATAGATAATTTTTAGTTTTGTATTGGCCA
CTTAACATCTTATGTGTAATTCTGACCCATTGGGTCAGCACGGGCCACTGGTCCTCACTC
CTTGTACTGATGTTTAGCTAATATAAAATAAATAAATTTTACGT