Microarray Probes on PGSC0003DMT400003463
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_999_PI426222305 |
JHI_St_60k_v1 |
GTCAACATCACTTACACTACTGAAACCCCGCCTTAAATGTTATTCATTGCTCTGATTTCC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400003463
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Source Transcript PGSC0003DMT400003463 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) |
Solyc02g089090.2 |
+1 |
4e-49 |
171 |
92/134 (69%) |
genomic_reference:SL2.50ch02 gene_region:45568082-45571263 transcript_region:SL2.50ch02:45568082..45571263+ go_terms:GO:0004672 functional_description:Pto-like, Serine/threonine kinase protein, resistance protein |
| TAIR PP10 |
AT5G39030.1 |
+1 |
4e-26 |
106 |
69/150 (46%) |
Protein kinase superfamily protein | chr5:15620066-15622486 FORWARD LENGTH=806 |
Transcript Sequence (570 bp)
>PGSC0003DMT400003463 570 pgsc_dm_v3.4
ATGTTATTCATTGCTCTGATTTCCTCTCTCCTATTACATCTAATGACAGTCACTATGACT
CTCACGCCACAGTACGATTACAATGCCACAGACCATCTTTTGCTGAATTGTGTCGCAGTA
TTGAAAGACCCAAAGTTAGCAGTCCCCGTTGAAGATTTCGATGGCCGTCAATGCGCTTTC
TATACAGTCGCTGCAAGTACCAATTCTAGTAAAGCTGTTCGAAAAGAATTTGTCATTAAT
GTTAATGAATTTCAGATACTCAATATAACCTTTTCTCCCTCGCCAAACTCTTATGCTTTT
GTTAATGGGATTGAGATAGTTTCCATGCCCACCAATCTTTACATCGGTGGAGATAATCGC
ATCAAATTGGTGGGCCAGAATGATCCTTATTCCATCTATAACGACACTGCTCTTGAAACT
TTGTACAGGCTGAACGTCGGAGGACATTCAATTGCTAGCACGGAGGATACAGGGATGTAT
CGTGTATATGAGGAATTTGTTGTTGTATATGGCTTTCAAACTCCTAAATTTGATGTCAAC
ATCACTTACACTACTGAAACCCCGCCTTAA
