- Probe CUST_614_PI390587928
- Source Contig U35_14080
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_614_PI390587928 | Hv_44K_v2 | CCTCTCTGTTGACTATGGAAAGAAGTCCAAGCTTGGGTTCACAGTGTACCCATCTCCTCA | 614 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | MLOC_69930.1 | 2090 | 2e-24 | 949 - 1008 | 100 | 60 / 60 | minus | ABC00127 ABC00169 ABC00333 ABC00411 ABC00803 ABC00902 ABC50944 |
| MLOC | MLOC_69930.2 | 1479 | 2e-24 | 945 - 1004 | 100 | 60 / 60 | minus | ABC00127 ABC00169 ABC00333 ABC00411 ABC00803 ABC00902 ABC50944 |
| MLOC | MLOC_7079.1 | 1740 | 3e-22 | 722 - 777 | 100 | 56 / 56 | plus | ABC00127 ABC00333 ABC00803 ABC00902 ABC48258 ABC50944 ABC52601 |
| JLOC1 | JLOC1_46368.1 | 2257 | 8e-25 | 884 - 943 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_4669.1 | 2053 | 1e-22 | 726 - 781 | 100 | 56 / 56 | plus | |
| Harvest21 | ABC00496 | 671 | 3e-25 | 612 - 671 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC00089 | 1702 | 3e-25 | 620 - 679 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC53205 | 393 | 5e-23 | 23 - 78 | 100 | 56 / 56 | plus | |
| Harvest21 | ABC00333 | 1756 | 5e-23 | 576 - 631 | 100 | 56 / 56 | plus | ABC00333 |
| Harvest35 | U35_14080 | 674 | 3e-25 | 615 - 674 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_14073 | 1699 | 3e-25 | 620 - 679 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_14084 | 1745 | 5e-23 | 601 - 656 | 100 | 56 / 56 | plus |
Contig Sequence (674 bp)
>U35_14080 674 Hv_44K_v2 AGAGACATCGCAGAGACCGGCGTCTTCGTACTCGCCTCTCTCTCGCGCCTCCGAGCTTTG GCCTCCGTCCTCCCTCCCTCCCTGCCCTCCCGCCCGCTTCCGGTTTCTCCACCGCCGTAG CGCCCGCCGCTCCGATCCGCCGGCGACATGAGGGAGTGCATCTCGATCCACATCGGCCAG GCCGGCATCCAGGTCGGGAACGCCTGCTGGGAGCTCTACTGCCTCGAGCACGGCATTCAG CCTGATGGACAGATGCCCGGGGACAAGACCGTTGGGGGAGGTGATGATGCTTTCAACACC TTCTTCAGTGAGACTGGTGCTGGGAAGCATGTACCCCGTGCTGTGTTTGTTGACCTTGAG CCCACTGTGATTGATGAGGTGAGGACTGGCACTTACCGCCAGCTCTTCCACCCTGAGCAG CTTATCAGTGGCAAGGAGGATGCAGCCAACAACTTTGCCCGTGGTCACTACACCATTGGC AAGGAGATTGTTGACCTATGCCTTGACCGTATCAGGAAGCTTGCAGATAACTGTACTGGT CTCCAGGGATTCCTTGTCTTCAACGCTGTTGGAGGTGGAACTGGCTCTGGCCTTGGTTCT CTCCTTCTTGAGCGCCTCTCTGTTGACTATGGAAAGAAGTCCAAGCTTGGGTTCACAGTG TACCCATCTCCTCA
Homology of Contig U35_14080 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | LOC_Os11g14220.1 | 452 | 3e-108 | protein|tubulin/FtsZ domain containing protein, putative, expressed |
| Brachypodium v1_2 | Bradi1g10150.1 | 452 | 2e-108 | |
| Arabidopsis v10 | AT4G14960.2 | 450 | 1e-109 | | Symbols: TUA6 | Tubulin/FtsZ family protein | chr4:8548769-8550319 REVERSE LENGTH=450 |