- Probe CUST_41568_PI390587928
- Source Contig U35_49175
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_41568_PI390587928 | Hv_44K_v2 | TTAGTTTGGTTGTTTATGCGAACCGATTTTCTCTCTGTATGATGATGTATTGCTGTTGTT | 81 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | AK248512.1 | 796 | 2e-24 | 623 - 682 | 100 | 60 / 60 | plus | ABC01287 ABC01302 |
| Harvest35 | U35_49175 | 401 | 3e-25 | 82 - 141 | 100 | 60 / 60 | minus |
Contig Sequence (401 bp)
>U35_49175 401 Hv_44K_v2 TTTTTTTTTTTTTTTTTACAAGAGATTATCCATTGCAATGACAGAGCCTCCAACGAACCA TCAAATCTCATGTTTACAGCTAACAACAGCAATACATCATCATACAGAGAGAAAATCGGT TCGCATAAACAACCAAACTAAACTAGAGGCACATCATAAAGCTCACAAGCATGGCTGCCG TTCGCATAAACAACCAAACTAAACTAGAGGCACATCATAAAGCTCACAAGCATGGCTGCC GCAGCAGTTTGTTTCGCTTCGCTAGTAAAGACAGCGACTTCCTTCCCCAACCACACAGTG GCTCGGCTCACATCATCTACCTCCTCACGGGAGGCGCGCCACCTAGTCCTCCTCCAACAG GGGGGCCGCCACCACGTCCACCGGCAGCCCGGGCACGCATG
Homology of Contig U35_49175 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |