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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_4026_PI390587928Hv_44K_v2GATTAAGTGTATTTGTCTTGCAATTATGTACGTGAAATGGAGAAGTTTTCACGAGGCAAA14GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK37629826563e-212600 - 26569856 / 57plus ABC09725 ABC18053
JLOC1JLOC1_37404.419435e-221764 - 18219857 / 58plus
JLOC1JLOC1_37404.319525e-221773 - 18309857 / 58plus
JLOC1JLOC1_37404.122125e-222033 - 20909857 / 58plus
Harvest35U35_493164423e-2515 - 7410060 / 60minus



Contig Sequence (442 bp)

>U35_49316 442 Hv_44K_v2
TTTTTTTTTTTTTTTTTGCCTCGTGAAAACTTCTCCATTTCACGTACATAATTGCAAGAC
AAATACACTTAATCCTCGCTGCAATGTGCAACTCTCTGTACATGCTATACGGGGTATAGA
CAACATATAGCTTAGCTATCTTTCGTGAACGGATTCCAGCACGGAGAGGCTATCAGAGCC
GTCGTGCTCGCTCTGCACCGGCGTGATCCTCCGGGGCTGCCGCTTTGTCCGCACGATCAC
CTCCTCCGCGCCGGGATCGTCGGCGACATAAAACTTGTCTACCCCATTGCTCTTGAACAC
TGGGTGAAGGTACGCGTCCCTCAGGTACGCCTTCAGGTCGAAGTTCCGCTCCCTCGTGCG
TTCCAGCGTATCCTTCCTCATCACCTCCTGTAGCGGGTTTCTCACAAACGCGGGTTCATA
CCGGTGCTTGCAGTACTTGGGG



Homology of Contig U35_49316 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None