- Probe CUST_39530_PI390587928
- Source Contig U35_13904
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_39530_PI390587928 | Hv_44K_v2 | CGCTATGGTTGTGATATGATGTGAAATGAAAAATGAGGGCAAAAGTTTGTTCGCAAAAAA | 769 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | AK357068 | 3933 | 7e-23 | 775 - 834 | 98 | 59 / 60 | plus | ABC00064 ABC00146 ABC00541 ABC00668 ABC18698 ABC36822 ABC39327 ABC53030 |
| MLOC | MLOC_24567.1 | 950 | 3e-22 | 240 - 295 | 100 | 56 / 56 | plus | ABC00146 ABC00668 ABC36822 ABC39327 |
| JLOC1 | JLOC1_16881.1 | 720 | 1e-22 | 240 - 295 | 100 | 56 / 56 | plus | |
| Harvest21 | ABC39327 | 459 | 3e-25 | 12 - 71 | 100 | 60 / 60 | minus | ABC39327 |
| Harvest21 | ABC00206 | 967 | 3e-25 | 771 - 830 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC36822 | 188 | 1e-23 | 12 - 71 | 98 | 59 / 60 | minus | ABC36822 |
| Harvest21 | ABC00668 | 2046 | 1e-23 | 14 - 74 | 98 | 60 / 61 | minus | ABC00668 |
| Harvest21 | ABC00010 | 835 | 1e-23 | 767 - 826 | 98 | 59 / 60 | plus | |
| Harvest21 | ABC46882 | 299 | 6e-22 | 34 - 90 | 98 | 56 / 57 | minus | |
| Harvest35 | U35_43100 | 459 | 3e-25 | 12 - 71 | 100 | 60 / 60 | minus | |
| Harvest35 | U35_13904 | 966 | 3e-25 | 770 - 829 | 100 | 60 / 60 | plus |
Contig Sequence (966 bp)
>U35_13904 966 Hv_44K_v2 CAGGGGTTGGCTTCTCCTCCCCACTCAGTCCTCGGTTCCCCCGGTCCGGTTCGGTTCGGT TCGTTAGGGTTTAGCGGCGGGGAGAAGGATGGCCGACGTCGAGTACCGCTGCTTCGTCGG CGGCCTCGCCTGGGCCACCGACGACCAGTCCCTCCAGAACGCCTTCTCTAAGTACGGCGA CGTCATCGACTCCAAGATCATCACTGACAGGGAGACGGGCCGTTCCCGCGGGTTCGGGTT CGTCACCTTCGCGTCGGACGAGGCGATGCGCCAGGCCATCGAGGCCATGAACGGCCAGGA CCTGGACGGCCGCAACATCACTGTCAACGAGGCCCAGTCCCGCCGCTCCGGCGGAGGAGG AGGCGGCTTCGGCGGCGGCGGCGGCGGCTACGGAGGCCAGCGTCGTGAGGGCGGAGGCGG CGGCTACGGAGGCGGCGGCGGTGGCTACGGAGGTGGCCGCAGCGGCGGCGGCGGCGGCTA CGGCAGCCGTGACGGCGGCGGCGGCGGCTACGGCGGCGGCGGCGGCGGCTACGGTGGCAG CCGCGGCGGCTCCGGCGGCGGCAACTGGAGGGAGTGAATGGTGGGGCCCCTTGTCGGCCA GTTATCCTAGTTATCGATCTATCCTTTTCGTTTACCTGTCTACCGTGTTATCGCTCGCTC CCGAGTAACCCTAGATCTCGCTCCATCGCTTAGGTTCTGAGATGCTCTGGCTACCGTTAG ATGTGACGCTACCGTTCCGTGCTACTTGTTACCGTTCCCCTGTTCCGTTCGCTATGGTTG TGATATGATGTGAAATGAAAAATGAGGGCAAAAGTTTGTTCGCAAAAAAAAAAAAAAAAA ACCGTTAGTTTTCTGTTGGCAAAAAAAAAAAAAAAAAGTTTATTCCTTTCTCCTGATCGT GCCCTGCCGTGGACGTTATTCCTCTTGGGCCTGATATTTTGCCTGTTGCAAAAAAAAAAA AAAAAA
Homology of Contig U35_13904 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |