barSeed
Links

Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_38405_PI390587928Hv_44K_v2TATACTCCCTCCGTTCTAAAAGAAGTGTCGTGGTGTTAGTTCACGACACATGACCTGCAT76GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_46768.13383e-2160 - 1199758 / 60plus None
MLOCMLOC_29448.116783e-21215 - 2749758 / 60minus ABC13665 ABC13666
JLOC1JLOC1_30253.14392e-2159 - 1189758 / 60plus
JLOC1JLOC1_19608.116732e-21210 - 2699758 / 60minus
Harvest21ABC289794943e-2577 - 13610060 / 60plus
Harvest35U35_296134943e-2577 - 13610060 / 60plus



Contig Sequence (494 bp)

>U35_29613 494 Hv_44K_v2
CGCAAAAAGAGGTTGAACCCCCAAGCAACATGACCATGATATCCATACATACATACATAC
TCCCTCCGTTCCAAAATATACTCCCTCCGTTCTAAAAGAAGTGTCGTGGTGTTAGTTCAC
GACACATGACCTGCATCCATCCATCCAGCCAGCTCCGGAGCTGCTCATACCTGGCCTCGA
CCGACCAAACCTCCCGCTCCAACGACGCATCAGACAACAGAGCACGGTTCCCAGCCCACA
CGCACAGCCGAATCCAAGGCAATGGAACGGCGGTGGCTGGCGGCACCGTAGCTGTGGGGA
ACTGACGCGGCGGACATCCGGACGATAGGCCAGCGATCCGGCAACGAGAGCTCCCCTGAT
TTGGTTTATGGTTTGGGTCTAGTGGTGTGAACTGCGCGCACGCACGCAACGAGAGAGAGA
GAGAGAGAGCTTGCACGCACGCTCGCACCGGATCCAAAGAAAAACGAAGCCAGGCTGCGA
GAAATCCATCGACG



Homology of Contig U35_29613 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None