barSeed - Barley Seed Development Database

Probe ABC13666

Source Contig ABC13666

barSeed

Links

Affymetrix Source Sequence (631 bp)

>ABC13666 631
CACACACACACACACACACACTCACCCTAAAACAAATCAGTCAAGCTCTCATTGCCGACT
CGCTGACCCGTCGTCTGTCTGGGGGGCTGCAACATCAGTTCCTCGAATCTACGGTGCTGC
CAGCCACCGCCATTCCATTGTGCCTTGGATTTGGTTGTGGCGTGGGCTGGGAACCGTACA
GTGTTGTCTGATGTGTCATACGAGCCGGAGGTTTGGTCAGCTGACGCCGGGCATGAGCAG
CTCCTGAGATTGTCTAAGTTACTCACCACTATGACCAGTCTGATGGATGGATGGATGGAT
GCTACTGTGTGATGAAGAGATGGAGTTCTTACCAGGGGCGATGATGATGACCCTGGCTGA
AATAAGCATGTCTTGAGCAATTAAGACAGCTGTGGCCTGTGGCTACTAAATTAGAGCGCA
CCCTTACCTCTCTTGCAGCAATTCAATTCATAGCTAATGTTGGATGTTCTGTGCCTTGGA
CGGTCATTCTGATGAATGATAACCAGGACAGTCCTCTTACATCGCGATGGGTAGATTATG
CAGCAAGCTATGTGAGTGTTGGGCTTTAAGATGAAAGGCAAAACTGAGCCCTCAAAAAAA
AAAAAAAATAAAAAAAACAAAAAAAAAAAGA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_29448.1	1678	0.0	810 - 1401	99	587 / 593	CUST_20356_PI390587928 CUST_38405_PI390587928	ABC13665 ABC13666
MLOC_28907.1	3219	1e-56	1117 - 1300	89	163 / 184	CUST_20358_PI390587928	ABC13665 ABC13666
MLOC_73406.1	3403	1e-90	2463 - 2680	94	210 / 223	None	ABC13666
MLOC_43092.1	4186	1e-81	89 - 347	88	228 / 259	None	ABC12151 ABC13665 ABC13666
MLOC_43092.2	4059	1e-81	88 - 346	88	228 / 259	None	ABC12151 ABC13665 ABC13666