barSeed - Barley Seed Development Database

Probe ABC13665

Source Contig ABC13665

barSeed

Links

Affymetrix Source Sequence (756 bp)

>ABC13665 756
GTCGTTCTGATGAGTGATAACCAGGGCAGTTCTATTACATCGCGATGTGTGGATAGCAAG
AGAGTGAGTGCTGGGTTTGAAGATGAAAGATAAAACTGAGCCATCAATTTTTCACCGTTT
AGTTGCATCTTGTTTTGGATTCGGTATGGATCCTCCTCACCTCTCTCTCTCTCTCTCTCT
CAAACCCTACGCTCTCATTGCCAACCCGCTGACCCATCGTCCGGGTGGCTGCCACATCAG
TTCCCTGTTACTACGGTGCTGCCAGCCTGCCATTCCATTGCCTTGGATTCGGTTGTGGCG
TGGGCTGGGAACCGTAGAGTTCTGTTCTGATGTGTCGTCTGAGACGGAGGTTTGGTCGGC
TGACTCCAGGTATGAGCAGCTCCCGAGACTGTCTAAGTTACTCACCACTATGGCCAGTCT
GATGGATGGATGGATGCTACTGTGTGATGAAGAGATGGAGTTCTTACAGGGGCGATGATG
ATGACCATGGCTGAAATAAGCATGTCTTGAGCAATTAAGACTGCTGTGGCCTGTGGGTAC
TAAATTAGAGCGCACCCTTACCTCTCTTGCAGCAATTCAATTCATAGTTAATGTTGGATG
TTCTGTGCCTTGGACGGTCATTCTGATGAATGATAACCAGGACAGTCCTCTTACATCGCA
ATGGGTAGATTATGCAGCAAGCTATGTGAGTGTCAGGCTTTAAGATGAAAGGCAAAACTG
AGCCCTCATCAAAAAAAACAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_28907.1	3219	2e-105	488 - 749	93	244 / 262	CUST_20358_PI390587928	ABC13665 ABC13666
MLOC_29448.1	1678	0.0	854 - 1401	91	501 / 550	CUST_38405_PI390587928 CUST_20356_PI390587928	ABC13665 ABC13666
MLOC_43092.1	4186	2e-60	404 - 647	84	210 / 249	None	ABC12151 ABC13665 ABC13666
MLOC_43092.2	4059	2e-60	403 - 646	84	210 / 249	None	ABC12151 ABC13665 ABC13666