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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_36740_PI390587928Hv_44K_v2GGAGTGCTGATTAATCTTAGGCTAGGGTGTGATAACTGATAACTGTTTGAATTAATTAAG594GeneList: darkgreen
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.7171.9982.6562.0280.5220.477
Raw 283.4711232.2571360.9701625.235150.038145.471



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK36856715452e-241462 - 152110060 / 60plus ABC09031 ABC09032 ABC09757 ABC24230
MLOCMLOC_30746.18872e-24151 - 21010060 / 60minus ABC09031 ABC09032 ABC24230
JLOC1JLOC1_20299.17448e-258 - 6710060 / 60minus
Harvest21ABC242306863e-2534 - 9310060 / 60minusABC24230
Harvest35U35_135706873e-25595 - 65410060 / 60plus



Contig Sequence (687 bp)

>U35_13570 687 Hv_44K_v2
TGCCGCTTGACCCGGACACGGAGCATTTGACCATCAAGACGGAGCCACCGGTGCCGCAGC
AGCAGACGCAGAGCCCCAGCTACTTCTTCATGCCGGCGGCGACGGCCAACGGCAACCACG
GCGGCGCCGGGTACTCACCCTACGAGGAAGCCATGGGGGACCAGCAGACCGCGATCCGCA
TGCACTGCAAGCCGGAGGCGGCGTCTTCGTCGGCGCTGCTGAGCCCTTCGCTCGGCCTCT
TCGACACGGGCGCGCTCGCCGGTGCCGCGGGCACCTCGTTCCCGATGCCGTCGTCGCAGT
CGTACGTCGATCTTGAGGAGCTGTGCCGGGGCGAGCCTCCCATGGACTTCTCCAACATGT
GGTAGATCTGAAATCTATCCATCCATCCGATGGACTGGATCGTCTCCGTTTGCTTCCTGG
TAGCCATAGGTGGTTAATTTCACTGGTTGGTGCTAGCTCGTGGATTGATTAGTTGCTTCA
TTAACTTTGATTAAGGATTGGGTTAATTAGGCGGTGACGATTCGAGGAGGAAGAGGATCG
TCGTTGTGTGTTTGTTGATGCGTGCAAGGCATAATGATGGCCTGTGAGCGAGAGGGAGTG
CTGATTAATCTTAGGCTAGGGTGTGATAACTGATAACTGTTTGAATTAATTAAGAGAAAA
GATTGTGTTCAAAAAAAAAAAAAAAAA



Homology of Contig U35_13570 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None