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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_32284_PI390587928Hv_44K_v2CCTTGTGGAAAGTGGAAACCTAAATTCAGACCGGTATGTGTTTGCTGTAGGTATATGTTT67GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK35544214249e-221223 - 12849760 / 62plus ABC03650 ABC03651 ABC03652 ABC21572
Harvest21ABC0365013628e-211269 - 13309559 / 62plusABC03650
Harvest35U35_482344913e-2568 - 12710060 / 60minus
Harvest35U35_138714868e-211269 - 13309559 / 62plus



Contig Sequence (491 bp)

>U35_48234 491 Hv_44K_v2
TTTTTTTTTTTTTTTTTAGGTGGCAACGAGCACAAACATTTTCTAGAGTTATGCAGAAGA
AGAAAAAAAACATATACCTACAGCAAACACATACCGGTCTGAATTTAGGTTTCCACTTTC
CACAAGGAACAACTAGCTAACGGTGTCCACTAGCACCATGTATGCAGATTGGTAATCACG
TCTCAAGCACTTGTTAAATTGTTGGGGGGGGGGGGAAACTGATTGTTCATGATGACCCTG
TGAAGAATAGCTCAGATACAATCACCACAATGCCGATGCCAAAAAAGGGTCACAGCTGCC
ACGGCTCTAATGCTCCAAGAATGGCTGGATAGGTTTTAGTTATCTGCCATCGGCTCTAAT
GCTCCAAGAATGGCTGGATAAGTTTTAATTATCTGCCATCGGGAGGTAGACCCGGTGGAA
GTTGCTTATGGTCAACTTCCTCCGGCAGGTAGGGCACTTCTTCTGAGCCTGGATGGAGGC
CTTGATGCACT



Homology of Contig U35_48234 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None