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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_29510_PI390587928Hv_44K_v2CAGTCTAAACCTGAGTACATGACAATTTTCAGTTCTCGTGTAATTTGAACTCCTACCGGT154GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK36990424512e-241755 - 181410060 / 60plus ABC04548 ABC04552 ABC43241
MLOCAK36435334762e-242706 - 276510060 / 60plus ABC04548 ABC04549 ABC04552 ABC43241
MLOCMLOC_41966.28022e-2464 - 12310060 / 60plus ABC04552
MLOCMLOC_41966.13202e-2466 - 12510060 / 60plus ABC04552
JLOC1JLOC1_27250.33078e-2566 - 12510060 / 60plus
JLOC1JLOC1_27250.22988e-2566 - 12510060 / 60plus
JLOC1JLOC1_27250.17908e-2566 - 12510060 / 60plus
Harvest21ABC521716373e-25155 - 21410060 / 60plus
Harvest21ABC045537383e-25601 - 66010060 / 60minus
Harvest35U35_501396373e-25155 - 21410060 / 60plus



Contig Sequence (637 bp)

>U35_50139 637 Hv_44K_v2
TCCTACAGGCTCAGGAGGATCTCAATATTGCTAAAGAAAGAGATAAGGATCAGCACTATA
ATTGTTGAAAAAAACTCAGATACATGTACCATATGAATTATCATATGCAGCGGGCACAAT
ATGCTTTCTACATGCCATTTTCTTATTGACTAAACAGTCTAAACCTGAGTACATGACAAT
TTTCAGTTCTCGTGTAATTTGAACTCCTACCGGTTCAGATTTCAGCATTCCCTGCAATTC
TTGATTTGCGTCGTGCTGCAGCACACATGGCTCGTCGTCCTACCTGCTTCTGTGCCCTCT
ACTTCTTCCCACAAGATTGAGTGGCATGGGTTCTCATTGGGCAAATAAAGCACCTGACCG
CTCCGCCCACCGCCTTTACTACCTGCACGCACACATGAGTCACCACGCACTGCCTTCAGA
ATGTGCTTTCAAGAAGGGAAGTTGCTGAACAAAATGGAAGACGACGGGCACGGTGCGGTG
CACCTCTGCACCTCTTCGAGAGCGGATATGGTGGCGGGCGCGTAGTCCAACAGCCGGAGC
AATGGTTCCCTATAAGAGGGAAATTTCCATATGATTATTTTGGTACAGAATTATGTGATG
ATGGAGGATGGAGCTGTCCTTTGAAGATTGTTTAATG



Homology of Contig U35_50139 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None