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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_27710_PI390587928Hv_44K_v2AATAAGCATGGATCAATAAATAGATGCTGACCACCAGCATGCTACCTGTGGATCAAAAAA464GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_2643.27333e-22620 - 67510056 / 56plus ABC00034 ABC00050 ABC00088 ABC00447 ABC00494 ABC01010 ABC31141
JLOC1JLOC1_1574.15851e-22472 - 52710056 / 56plus
Harvest21ABC004744663e-25335 - 39410060 / 60plus
Harvest21ABC010105825e-23466 - 52110056 / 56plusABC01010
Harvest21ABC004524645e-23335 - 39010056 / 56plus
Harvest21ABC0049411672e-211057 - 11129855 / 56plusABC00494
Harvest21ABC004475272e-2112 - 709758 / 60minusABC00447
Harvest21ABC000884652e-21336 - 3919855 / 56plusABC00088
Harvest21ABC000504462e-21336 - 3919855 / 56plusABC00050
Harvest35U35_9085353e-25465 - 52410060 / 60plus
Harvest35U35_9064985e-23350 - 40510056 / 56plus



Contig Sequence (535 bp)

>U35_908 535 Hv_44K_v2
GCACGAGGCTCGATCCCATTTAGCTGGTGATTAGTCTTAAGTTCCCAGTCCCATATGATT
TATGTACATAAAGATTTGTAGTCTTAAGTAGTCTGAGCTATGGTTCAACTGTTATTGTCG
TCTGTAGTCTCTGAACTGAACTATTTCGATCAATTTTTTTGCAGCCTGCCGAATCGAGGA
TGAGCTGCGCCGCCCCAAAAGCCCCCGCCGGAGAGGAGAAGAAGACGTCATGGCCGGAGG
TAGTGGGAAAGTCCATCGAGGAGGCCAAGGAGATCATCCTTAAGGACATGCCTGAAGCGG
ACATCGTCGTCCTCCCAGCCGGCTCGCCGGTGACCCTCGACTTCAGGACCAACCGTGTCC
GCATCTTCGTCGACACTGTCGCGTCCACTCCCCACATTGGCTAGCTAGCTTTGCAAGCAA
AGGCAACATGGATGCATTGTGGATGCTGATGAATAAGTACTTCCAATAAGCATGGATCAA
TAAATAGATGCTGACCACCAGCATGCTACCTGTGGATCAAAAAAAAAAAAAAAAA



Homology of Contig U35_908 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None