barSeed - Barley Seed Development Database

Probe ABC31141

Source Contig ABC31141

barSeed

Links

Affymetrix Source Sequence (555 bp)

>ABC31141 555
GCAAGTTCAGGGTAAGCTCGATCCCATTTAGCTGCTCGAGGAATCAAGGATGAGCTGCGC
TGACCCAAAAGCACCCGCCGGAGAGCAGAAGAAGACGTCATGGCCGGAGGTAGTGGGAAA
GTCCATCGAGGAGGCCAAGGAGATCATCCTTAAGGACATGCCTGAAGCGGACATCGTCGT
CCTTCCTGCCGGCTCGCCGGTGACCATGGACTTCAGGAGCAACCGTGTCCGCATCTTCGT
CGACACTGTCGCGACCACTCCTCACATCGGCTAGCTAGCTACCTTTGCTCGCGGCAGGCA
TCACGTCTGCTGATGGCCAAGTAATAATTTCAATAAAGGATGAATTAGTGCGCGCTGACA
ACCAGCATGTTACTTATGGATCCATGTACTTTTCTTTTCCAATTGTGTGAATGGATGTGC
TCCACGGGTTAATTATTTGCAGTTTGCGTTTTCCCATTTTGGTGTGCAACTACTACTCCC
TCCGTCTCATTTTTGTGCAACGATCTTATATTATGGGACGGAGCGACTACGCCGTAATTA
TCTAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK252573.1	491	0.0	18 - 473	93	425 / 456	CUST_6340_PI390587928 CUST_27714_PI390587928	ABC00034 ABC00050 ABC00088 ABC10998 ABC31141 ABC42591
AK372217	1124	4e-165	710 - 1124	92	382 / 415	CUST_6340_PI390587928 CUST_27714_PI390587928	ABC00034 ABC00088 ABC10998 ABC31141 ABC42591
MLOC_81846.1	1093	9e-152	1 - 393	91	360 / 394	None	ABC00034 ABC00088 ABC10998 ABC31141 ABC42591
MLOC_81846.4	385	9e-152	1 - 381	92	351 / 381	None	ABC00034 ABC00050 ABC00088 ABC10998 ABC31141 ABC42591
MLOC_81846.2	1223	9e-147	1 - 381	91	348 / 381	None	ABC00034 ABC00088 ABC10998 ABC31141 ABC42591
MLOC_81846.3	467	2e-133	1 - 348	91	318 / 348	None	ABC00034 ABC00088 ABC10998 ABC31141 ABC42591
MLOC_2643.1	583	4e-120	247 - 525	95	264 / 279	None	ABC00034 ABC00050 ABC00088 ABC00447 ABC00494 ABC01010 ABC31141
MLOC_34615.2	375	2e-103	124 - 375	94	236 / 252	None	ABC00034 ABC00050 ABC00088 ABC00447 ABC00494 ABC01010 ABC31141
MLOC_2643.2	733	7e-103	312 - 565	93	237 / 254	CUST_27712_PI390587928 CUST_27710_PI390587928 CUST_27713_PI390587928	ABC00034 ABC00050 ABC00088 ABC00447 ABC00494 ABC01010 ABC31141
MLOC_34615.3	425	2e-98	185 - 424	94	225 / 240	None	ABC00034 ABC00050 ABC00088 ABC00447 ABC00494 ABC01010 ABC31141
MLOC_34615.1	352	2e-88	140 - 352	94	201 / 213	None	ABC00034 ABC00050 ABC00088 ABC00447 ABC00494 ABC01010 ABC31141
MLOC_43333.1	206	1e-66	4 - 189	91	170 / 186	None	ABC00034 ABC00088 ABC31141 ABC42591
MLOC_43333.2	176	3e-52	3 - 156	91	140 / 154	None	ABC00034 ABC00088 ABC31141 ABC42591