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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_22071_PI390587928Hv_44K_v2GATCATCACGGACATGAACTACTACCCGGTCTCCCGCTATCATTTTGACCTCAGCGGCAC303GeneList: None
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.0690.8291.7361.8190.5640.550
Raw 1616.5681972.3923495.7775355.567682.708700.976



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK3665928752e-24167 - 22610060 / 60plus ABC02873 ABC02877 ABC08009
MLOCMLOC_67870.114952e-24598 - 65710060 / 60minus ABC02873 ABC02877 ABC08009
MLOCMLOC_67870.216052e-24598 - 65710060 / 60minus ABC02873 ABC02877 ABC08009
JLOC1JLOC1_44853.217178e-25921 - 98010060 / 60plus
JLOC1JLOC1_44853.115638e-25767 - 82610060 / 60plus
Harvest21ABC237985343e-2586 - 14510060 / 60plus
Harvest35U35_147797053e-25304 - 36310060 / 60plus



Contig Sequence (705 bp)

>U35_14779 705 Hv_44K_v2
GCTAGCGCGACCCCNGCGTCGCCCTCCCTGGCGGTGGCGGGGGAACCCTAGCCCGCAGCC
CCGCCCTCCACCTCGCCGCCTCCCACGAAGGTGGCGGCGGGGCTGACTCCTGCCTTCAGT
CCCCCTTCTCCTCGCCCGCCCGTCGGCTCCGGCCGTTCGCTGCGCCCGGCGCCGGCGCGA
CTCCGCCGGCCCGCTGCTGCCCCGTCCCAGCTCACCCCCTTGCCACCGGCTGCTTCCAGC
GCTTGGCGTCAGCGAGATCAGGTGCGTGGCCCATCGTGCCTGCTCCGGCGTCCCGGAAAC
GGTGATCATCACGGACATGAACTACTACCCGGTCTCCCGCTATCATTTTGACCTCAGCGG
CACCGCCTTCGGTGCCATGGCCAAGTACGGCCGCAACGACGAGCTCCGCCACGCTGGCAT
CATCGACATGCAGTTCAAGAGGGTGCCGTGCCAGTACCCGGGGCTCACGGTGACGTTCCG
CGTGCAGCACGGGTCCAACCCCAACTACCTGGCGATCCTGGTGGAGTACGAGGACGGCGA
CGGCGACGTGGCGCAGGTGGACATAATGGAGTCACGGCTGCCGGACAGGGCGCCGACGGG
GTACTGGACGCCGATGAGGGAGTCGTGGGGATCCATCTGGCGCCTGGACAGGCTCCGCCC
GCTGCAGGGGCCATTCTCGCTGCGCGTCACCGACGAGTCCGGCAG



Homology of Contig U35_14779 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os03g01270.13285e-84protein|expansin precursor, putative, expressed
Brachypodium v1_2Bradi1g78340.23172e-81
Arabidopsis v10None