- Probe CUST_2201_PI390587928
- Source Contig U35_14990
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_2201_PI390587928 | Hv_44K_v2 | GAATGGATGCTATGGAACTATATTTGTTATGGAGCTATGTATGTATGGATGCTATGAAAC | 642 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | AK373035 | 4269 | 7e-23 | 4186 - 4245 | 98 | 59 / 60 | plus | ABC01658 ABC01659 ABC01661 ABC13588 ABC38555 ABC39899 ABC49794 |
| MLOC | MLOC_59043.1 | 124 | 7e-23 | 48 - 107 | 98 | 59 / 60 | plus | ABC01658 ABC39899 ABC49794 |
| MLOC | MLOC_33138.1 | 325 | 7e-23 | 218 - 277 | 98 | 59 / 60 | plus | ABC01658 ABC01659 ABC01661 ABC38555 ABC39899 ABC49794 |
| MLOC | MLOC_1994.1 | 284 | 7e-23 | 4 - 63 | 98 | 59 / 60 | minus | ABC01658 ABC01659 ABC01661 ABC38555 ABC39899 ABC49794 |
| MLOC | MLOC_80450.1 | 176 | 3e-22 | 118 - 173 | 100 | 56 / 56 | plus | ABC01658 ABC01659 ABC01661 ABC38555 ABC39899 ABC49794 |
| MLOC | MLOC_3897.1 | 244 | 9e-22 | 156 - 213 | 98 | 57 / 58 | plus | ABC01658 ABC01659 ABC01661 ABC38555 ABC39899 ABC49794 |
| MLOC | MLOC_81662.1 | 306 | 3e-21 | 78 - 137 | 97 | 58 / 60 | minus | ABC01658 ABC01659 ABC01661 ABC38555 ABC39899 ABC49794 |
| JLOC1 | JLOC1_21507.1 | 327 | 4e-23 | 219 - 278 | 98 | 59 / 60 | plus | |
| JLOC1 | JLOC1_1208.1 | 284 | 4e-23 | 4 - 63 | 98 | 59 / 60 | minus | |
| JLOC1 | JLOC1_2351.1 | 244 | 5e-22 | 156 - 213 | 98 | 57 / 58 | plus | |
| Harvest21 | ABC39899 | 561 | 3e-25 | 54 - 113 | 100 | 60 / 60 | minus | ABC39899 |
| Harvest21 | ABC01658 | 1412 | 1e-23 | 1256 - 1315 | 98 | 59 / 60 | plus | ABC01658 |
| Harvest21 | ABC49794 | 716 | 6e-22 | 81 - 140 | 97 | 58 / 60 | minus | ABC49794 |
| Harvest35 | U35_14990 | 755 | 3e-25 | 643 - 702 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_37708 | 690 | 1e-23 | 98 - 157 | 98 | 59 / 60 | minus | |
| Harvest35 | U35_14989 | 1377 | 1e-23 | 1256 - 1315 | 98 | 59 / 60 | plus | |
| Harvest35 | U35_14995 | 689 | 6e-22 | 576 - 635 | 97 | 58 / 60 | plus | |
| Harvest35 | U35_14988 | 1058 | 6e-22 | 944 - 1003 | 97 | 58 / 60 | plus |
Contig Sequence (755 bp)
>U35_14990 755 Hv_44K_v2 GAGAGAGAGCGCGCAGCCGCAACTAGGGTTCCTCGCGCTGCGCCGCCGGCCAGCAGAAGC AGGAGATGCCGCCGCCCGCCATGGCGATGCCGCAGGCACCCTCCGTAGGGGATCCGCTCT ATGACGAGCTTTGGCACGCCTGCGCCGGCCCGCTCGTCACTGCCCCGCGCGTCGGGGACC TCGTCTTCTACTTCCCGCAGGGGCACATCGAGCAGGTGGAGGCCTCCATGAACCAGGTCG CCGGCAACCAGATGCGCCTCTACGATCTGCCGCCCAAGCTGCTCTGCCGGGTCATCAACA TCGAGCTCAAGGCGGAGGAGGACATCGACAAGGTATACGCGCAGGTCATACTCATGCTGG AGCTGGAGGGGCTTGGGCCATGCTCCACGAGCATCAAGACGGACGAGAAGGAGATCAAGG AGTTGGCCAAGAGGATCAATGACCTTTGTGGGGAAGTTCAAAAGGACCGCGCGCTGGAGC TCCTAAACGTGCGCCCCTTCTACTTCGTTTACTTATGTGGCGTGAAGACATAAAGCAAAC CTTTGGAGCCATAGTTGTCTTTTTTGTCATCTAAAATAATAATGGTAACATATTAATACA AACAAAATAATATTCTAGCTCAAAAAATTGTATGTGAATAATGAATGGATGCTATGGAAC TATATTTGTTATGGAGCTATGTATGTATGGATGCTATGAAACTATATGTATATATGGATG CTATGGAATTTTGGATGTAAAAAAAAAAAAAAAAA
Homology of Contig U35_14990 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |