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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_21279_PI390587928Hv_44K_v2TTACCACTGATCTTCTTCTCCAGTGCAGAGGCGGGCGAGGTGGGCGTGTGCTATGGCAGG55GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK35881433872e-241494 - 155310060 / 60plus ABC08262 ABC08885 ABC08886 ABC18116 ABC23510
MLOCMLOC_80320.518242e-241690 - 174910060 / 60minus ABC08262 ABC18116 ABC23510
MLOCMLOC_80320.219752e-241751 - 181010060 / 60minus ABC08262 ABC18116 ABC23510
MLOCMLOC_80320.417552e-241629 - 168810060 / 60minus ABC08262 ABC18116 ABC23510
MLOCMLOC_80320.119172e-241789 - 184810060 / 60minus ABC08262 ABC18116 ABC23510
MLOCMLOC_80320.610639e-22932 - 9939760 / 62minus None
JLOC1JLOC1_53480.120218e-25170 - 22910060 / 60plus
Harvest21ABC194985763e-2556 - 11510060 / 60plus
Harvest35U35_244025763e-2556 - 11510060 / 60plus



Contig Sequence (576 bp)

>U35_24402 576 Hv_44K_v2
CTCACAAACCATGGCGCACACTCGCCTCCTCCTGCTCGCCATTCTCGGCGCCTCATTACC
ACTGATCTTCTTCTCCAGTGCAGAGGCGGGCGAGGTGGGCGTGTGCTATGGCAGGGTCGG
CGACAACCTGATGGACCCGGCGGCGGTGGTGCAGCTGCTGAAGAAGAACGGCATCACGAC
GGTGAGGGTCTACGACACCGACCCGGCCGTGCTGCGGGCGATGGCCAACACCGGCATCAA
GGTGGTGGCGGCGCTGCCCAACGAGATGCTGGCCTCCGCGGCCGGCGACCCATCGTACGC
GCTCCGGTGGGCGAGGATCAACCTGGCGCCCTACTACCCGGCCACGGACATCCGCGGCGT
GACCGTCGGGAACGAGGTCTTCCAGCAGGCGCCGCAGCTCACGCCGCAGCTCCTCACGGC
CATGCGGAACGTGCGGGCGGCGCTGGTCACCCTGGGCCTGGGCGACGCCGTGAAGGTGAC
CACCCCGATCGCGTTCGACGCGCTCAAGGTGTCGTTCCCGCCGTCCAGGAGCGCGTTCCG
GGACGACATCGCGCGGTCAGTGATGAGCCCCATGCT



Homology of Contig U35_24402 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os07g35350.34568e-67protein|glucan endo-1,3-beta-glucosidase precursor, putative, expressed
Brachypodium v1_2Bradi1g25517.15633e-69
Arabidopsis v10None