barSeed - Barley Seed Development Database

Probe ABC23510

Source Contig ABC23510

barSeed

Links

Affymetrix Source Sequence (861 bp)

>ABC23510 861
CCGGGCCGGCGCTGGGCATGACAAGTCCAGCTGGTGCGAGGCGAACGCGGCGGTCGGGGA
CGCACGTATCCAGGCGGCGCTGGACTGGGCGTGCGGCAACGGGGCGGACTGCAGCGCCAT
CCAGCCCGGGAAGCCATGCTACGAGCCCAATACCAAGGTGGCGCACGCCTCCTACGCCTT
CAACGACTACTACCAGCGCAAGGGCCGGGCCAGCGGGACGTGCGACTTCGCCGGCGCCGC
TTCCATCGTCTACCGGCAACCAACAGGCACCTGCGACCCCAAGGCAGGGAGCTGGTGCGT
GGNAACGCGGCGGTCGGGGACGCTCGGCTGCAGGCGGCGCTGGACTGGGCGTGCGGCCAC
GGGGCGGACTGCAGCGCCATCCAGCCCGGCGCGCGGTGCTTTAGTCCTGATACCAAGGCC
GCGCACGCGTCTTACGCATTCAACGACTACTACCAACGCAACGGCCGGTCTGACACCTCA
TGCCATTTCGGCGGAGCCGGCTCTGTTGTTCACCAGGCACCAAACATAGGCAACTGCGTG
CTGCGATCAAGGGCCTGAAGACCTGAACAGACAACTGGTAGCAAAGGCCAAAGCTTAGGC
CATTAGCTTGGAATAATGAACTCAACACTCTGCTACTTCGTATCAAGGGAGCGTAGCCAG
TTTACTGCTGTAAAACTAGGCGAATAAGCCCATGTGCTTTGTGATCCGACGGTCTATGTC
TACTCCCTTTGTAACTAAATAACTGTAGTTGGAAGAACTAATCTAGTAGTTCTCTTCAAC
TATAATTATTTAGATATAAAAAATATATATTACAAGTAATGCTATCGTAATAACTTCGAT
GTCTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_72542.1	1987	0.0	1 - 841	99	835 / 841	CUST_11491_PI390587928	ABC18116 ABC23510
AK361492	1854	1e-137	1198 - 1722	84	439 / 525	CUST_14577_PI390587928	ABC08262 ABC18116 ABC23510
AK358814	3387	2e-134	2576 - 3088	84	431 / 516	CUST_26970_PI390587928 CUST_16739_PI390587928 CUST_21279_PI390587928	ABC08262 ABC08885 ABC08886 ABC18116 ABC23510
MLOC_80320.1	1917	2e-134	254 - 766	84	431 / 516	CUST_26970_PI390587928 CUST_21279_PI390587928	ABC08262 ABC18116 ABC23510
MLOC_80320.4	1755	7e-130	91 - 606	83	431 / 519	CUST_26970_PI390587928 CUST_21279_PI390587928	ABC08262 ABC18116 ABC23510
MLOC_80320.3	1728	7e-130	91 - 606	83	431 / 519	CUST_26970_PI390587928	ABC08262 ABC18116 ABC23510
AK358330	836	2e-115	1 - 458	83	381 / 458	CUST_17970_PI390587928	ABC18116 ABC23510
MLOC_80320.5	1824	7e-80	434 - 667	90	210 / 234	CUST_26970_PI390587928 CUST_21279_PI390587928	ABC08262 ABC18116 ABC23510
MLOC_80320.2	1975	7e-80	495 - 728	90	210 / 234	CUST_26970_PI390587928 CUST_21279_PI390587928	ABC08262 ABC18116 ABC23510