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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_20151_PI390587928Hv_44K_v2TTGTATGTTTCCACTCTTTTCCCGAATTTCAGTGTTGAGCTTGCCTTTGATTTGAAAAAA384GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_77777.210959e-22946 - 100010055 / 55plus ABC02405 ABC02406 ABC02407 ABC02408 ABC31246
MLOCMLOC_77777.311619e-221012 - 106610055 / 55plus ABC02405 ABC02406 ABC02407 ABC02408 ABC31246
JLOC1JLOC1_51854.111915e-221008 - 106210055 / 55plus
Harvest21ABC312464503e-25385 - 44410060 / 60plusABC31246
Harvest21ABC024069242e-22132 - 18610055 / 55minusABC02406
Harvest35U35_311024503e-25385 - 44410060 / 60plus
Harvest35U35_7939662e-22781 - 83510055 / 55plus



Contig Sequence (450 bp)

>U35_31102 450 Hv_44K_v2
GAGACGGCAGGCGGCCAAGGACCGCGCCGCCGAGAGCAAGGACCAGACGGGGAGCTTCCT
CGGCGAGAAGACGGAGGCGGCCAAGCACAAGGCCGCCGAGGCAACCGAGGCGGCCAAGCA
GAAGGCGTCGGAGACGGCGCAGTACGCGCAGGAGAGGTCCTCCGACGCCGCGCAGTACAC
CAAGGAGTCCGCCGTCGCCGGCAAGGACAAGACCGCCAAGGACGCCGTGGCCAACACGCT
GGGCATGGGCGGTGACAACACCAACACCAGCAAGGACACCACCACTGGGAAGATCACCGG
GGATCACTAGACGCATGCATTCGCGCTCAGTTTAAATTTGCTTTCCTTTAGTCGTTTGGT
CGTTCGCGGGCCTTCCACATATATTTGTATGTTTCCACTCTTTTCCCGAATTTCAGTGTT
GAGCTTGCCTTTGATTTGAAAAAAAAAAAA



Homology of Contig U35_31102 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None