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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_19611_PI390587928Hv_44K_v2GCTGGAGTCCTCACTTTATTTGTTAAGACTATGTAATGACCGAATGATGTTATTTGTTTG378GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_69436.218152e-241633 - 169210060 / 60plus ABC02222 ABC02226 ABC48039
MLOCMLOC_69436.116072e-241464 - 152310060 / 60plus ABC02222 ABC02226 ABC48039
MLOCMLOC_69436.425072e-242210 - 226910060 / 60plus ABC02222 ABC02226 ABC48039
JLOC1JLOC1_46004.116338e-251367 - 142610060 / 60plus
Harvest21ABC480634653e-25378 - 43710060 / 60plus
Harvest21ABC480394523e-25367 - 42610060 / 60plusABC48039
Harvest21ABC0222610983e-2565 - 12410060 / 60minusABC02226
Harvest21ABC0222417793e-251620 - 167910060 / 60plus
Harvest21ABC022216763e-2540 - 9910060 / 60minus
Harvest35U35_365295823e-25102 - 16110060 / 60minus
Harvest35U35_6667103e-25587 - 64610060 / 60plus
Harvest35U35_66518453e-251643 - 170210060 / 60plus
Harvest35U35_6624663e-25379 - 43810060 / 60plus
Harvest35U35_6614493e-25369 - 42810060 / 60plus



Contig Sequence (466 bp)

>U35_662 466 Hv_44K_v2
GGGCTGCAGGGCGCCTCCGCTCCCACGCCGCCGAATCCGAGACCTGATCTCGGATTCACC
GCAGCGCGACCCCTCCGGCGATCCGCGGCACCTCCTCCCCGACGCTTCAGCCATGGCAGG
AATGGCACCGGAAGGTTCCCAGTTTGATGCAAAGAACTATGATTCTAAGATGCAGGAGCT
GCTGAGCCAAGGTGAGACCGAGGAGTTCTTCACCTCATATGATGAAGTTCATGAGAGCTT
TGATGACATGGGTTCTACTTTAAAGTCGTTGTCGTGGACAATTTGGGATTTATTAAGCCA
TGTTTTGGGAATTTTTGTAGTTGCTAGGCTGTGGTTCTATGTGCTGGGGAGGGAGGCGTC
GCTGCTCATGTTGCTGTTGCTGGAGTCCTCACTTTATTTGTTAAGACTATGTAATGACCG
AATGATGTTATTTGTTTGTGTCATCCTTGAAAAAAAAAAAAAAAAA



Homology of Contig U35_662 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None