- Probe CUST_132_PI390587928
- Source Contig U35_45893
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_132_PI390587928 | Hv_44K_v2 | TACTTTACAAGACGAGATCAGACTGGACGAGGCAGCTTCGCTTCCCGGACCTCCTCGTCT | 7 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | AK364348 | 2837 | 2e-24 | 1947 - 2006 | 100 | 60 / 60 | plus | ABC01817 ABC01818 ABC01819 ABC02584 ABC06112 ABC33656 ABC35116 ABC40607 ABC52711 |
| MLOC | MLOC_64823.1 | 1576 | 2e-24 | 517 - 576 | 100 | 60 / 60 | plus | ABC33656 |
| Harvest21 | ABC45272 | 150 | 3e-25 | 8 - 67 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_45893 | 150 | 3e-25 | 8 - 67 | 100 | 60 / 60 | plus |
Contig Sequence (150 bp)
>U35_45893 150 Hv_44K_v2 CTCCTCCTACTTTACAAGACGAGATCAGACTGGACGAGGCAGCTTCGCTTCCCGGACCTC CTCGTCTGCGAGCCGCTCTCGCGGCGGTGCCAGGGGATCGCCTACCCGCCGGCGATGCGC CTCCACCTGTGCTTCGGCGCGTTCCTGCTC
Homology of Contig U35_45893 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |