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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_12284_PI390587928Hv_44K_v2AGCAATGATTGTGAATACAATAAGTGAAGGTTTGAGATGTCTCATCTCTGTCGCAGGATA582GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_30133.17672e-24261 - 32010060 / 60minus ABC07976 ABC08667 ABC08668
MLOCMLOC_30133.26872e-24261 - 32010060 / 60minus ABC07976 ABC08667 ABC08668
JLOC1JLOC1_19972.16888e-25369 - 42810060 / 60plus
Harvest21ABC0866810203e-25583 - 64210060 / 60plusABC08668
Harvest35U35_387810203e-25583 - 64210060 / 60plus



Contig Sequence (1020 bp)

>U35_3878 1020 Hv_44K_v2
GCTGAATGTTGCTGATATGAGACTATAATTAACTGAATTCTGCCGTCAAGTGATTCAGGA
ACAGGATGTCTCAGGGTCCAAATGCTAGACTTATTATACCTAGCAAGGTCCAAATGCTAG
ACTTATTATACCTGATAAGAGATGTTTGCATGTACTGTTGGCATGCCGTTCGATTCAACA
CAAGAAGCATAACAAAGTACTCAATATGCTGGAATAAATCTGGTTTGCATGAAGTTATTT
TAGGAACAACTGGGAGGAAACAAGGCACATCTTCAAAGGCAACATCCTTCCCCTCCACCG
AGTCATTGCTCTGCAAGTAAGAGAGTTCCCTTTCTCATTCCTAGCATTCTGAATTCCTGA
TGTAAGCCTGGCAAAATATCTGCGTTTTGATGGCAGGATAAGATTGGCAGTGGCCTTCAT
ATCACTTGAACATCCATTAGTCACAAAGTTCCATCATGAGAAGATTGCTTATCGTGCAAT
TAAGGGATTTTATCCTATACTGTATGGTTTTTAATTACTCAGATGGATAATGAGTTGAAG
GCACAGAGCTAGATTACATTAAATGATTTCCGATTCCTTGTGAGCAATGATTGTGAATAC
AATAAGTGAAGGTTTGAGATGTCTCATCTCTGTCGCAGGATATGGCTTGTGAGTACTAGC
AGATGCTTGAGCTTCTTAGAAAGGCCCCATTTTTTGGCAGATGGCGTGCTAAGCCAGGAT
CCGTTGATTCGTTTACAGTTCCACGGTGATGACTAGATCTTGAGGTTCTATGTTGTGTCG
TAGAGGCTGGTTCTTGAAGTTTCTTGGTTTCACCACAATTTTAGCAGTTTTGTGTATCAG
CTCTTTCAGCTTATTTGTAGCATGTGTGCTTCTGCACAATACTGAAGTTTTGAACAGTGA
TAGCCTGTAACAAACCTATAAAGCCCTATGATGTTTGGCACCATGAGGTGTTTATATGGA
TCGGTAACTCTGTAACTCTTATTATTTTAATTGTGTGTTAGAAAAGAAAAGTAGAAGGAA



Homology of Contig U35_3878 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None