barSeed - Barley Seed Development Database

Probe ABC53005

Source Contig ABC53005

barSeed

Links

Affymetrix Source Sequence (939 bp)

>ABC53005 939
CGGATCCAAGCTTATCGATTTCGAACCCGGGTACCGCCTTCCCCGGCCGCGTCGGGCTCG
CCAAGGTCCACCCGCCGCGACGTCGCCGTCCAGGCCAAGGGGTCCTGGCTCCCCGGCCTC
CAGTCCCCTGCCTACCTAGACGGCAGTCTGGAGGGTGACAATGGTTTTGACCCGCTGGCG
CTGGCGGAGGACCCGGAGGACCTGCGGTGGTTCGTGCAGGCGGACGTGGTGAACGGGCGG
TGGGCGATGCTGGGGGTGGCGGGGATGCTGATCCCGGAGGTGCTGACCAAGGCGGGGCTG
ATGAACGCGCCCGAGTGGTTACGACTGCCAGGCAAGGAGACCTACTTCGCCTCCTCCTCC
ACTGCTCTTCGAGTCCATATGAGTTCCACCTACGTCGAGATCCGGCGGTGGCAGGACATC
AAGAACCCGGGCTCCGTCAACCAGGACCCCATCTTCAAGAGCTACAGCCTCCCGCCCCAC
GAGTGCGGCTACCCCGGCAGAGTCTTCAACCCCCTCAACTTCGCCCCCCTCGAGAACAAG
GAGAAGGAGCTCGCCAACGGGAGACTGGCCATGCTGGCGTTCCTGGGGTTCCTGGTGCAG
CACAACGTGCACGGGAAGGGGCCGTTCGAGAACCTGCAGCAGCACCTGGCCGACCCATGG
CACAACACCATCATCCAGACCATCTCCGGCCAATAAATCCGTCGATTTCACCGACCAAGG
AGGTTTAGGTGGTCTGAATTATTATTTTGGGGTGCTGAGGATGTACAAAGTGTGGAGGAG
TAGGTGGCAGTGCAAAAACGTGTTGTAATGTTCCGGTGGTGAAACTTTGTCCTTGTGGAT
TCGCCCATGGCTTCCGACGGAGCTGTACTTGTAATATATACCCATGCGTGTTATTTTAAA
ACATGGCAAAACATACTACTAGTTTGAAGCATTAGTATC

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_44757.3	3353	152 - 1057	96	875 / 913	CUST_10812_PI390587928 CUST_22370_PI390587928	ABC02300 ABC24776 ABC46979 ABC53005
MLOC_44755.2	1072	157 - 1054	96	867 / 905	CUST_10812_PI390587928	ABC02300 ABC46979 ABC53005
MLOC_44757.1	3468	487 - 907	94	402 / 426	CUST_12313_PI390587928 CUST_10812_PI390587928 CUST_22370_PI390587928	ABC02300 ABC24776 ABC46979 ABC53005
MLOC_44757.2	3398	487 - 907	94	402 / 426	CUST_12313_PI390587928 CUST_10812_PI390587928 CUST_22370_PI390587928	ABC02300 ABC24776 ABC46979 ABC53005
MLOC_44755.1	2573	496 - 916	94	402 / 426	CUST_10812_PI390587928 CUST_22370_PI390587928	ABC02300 ABC24776 ABC46979 ABC53005