barSeed - Barley Seed Development Database

Probe ABC52587

Source Contig ABC52587

barSeed

barSeed Home
List Cluster Sets
List Cell Wall Probes

Links

James Hutton Institute Home
BioSS Home

Affymetrix Source Sequence (418 bp)

>ABC52587 418
TGGCCCGAGGGGAAGGTTTTAATTTGTCATACAACCCTTTTAGTTTTTCCCCCAAAAAAA
TAAAAGGATCGGTCCAAGAAGGTTTTTGGGGTGGTCCCCCTGGTTTTTGCGGCCCCAAAG
TTCCAGGGAGCAGTGCAGGTAGCTTTGGCGAGGGAGTGTAGGTCAAACACCAAAAAGTTT
GTGGGGCTGTGGGTGAACGACCCCAACTGTGCAAGGGTGGGCCTGACCCAGGGTTTCCCC
GGAGGCAAGTGCGACAGCATTTGGAAGCGTTGTGTTTGCCCCATGAACTGTTAAATGTTG
GGTTTGCCCCATGAACTGTTAAAAGGCCCTGTTTTTTTTTTGCAAACAAGGTTCCGGGTA
AAAAAGTAACTGAATAAAACTATTTGTGTGATGTATGGGGCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_19160.1	516	1e-89	170 - 456	87	251 / 287	CUST_10960_PI390587928 CUST_10962_PI390587928	ABC00051 ABC00255 ABC00507 ABC43663 ABC48315 ABC52587
MLOC_1377.2	1002	1e-50	726 - 993	80	215 / 268	None	ABC00255 ABC43663 ABC52587