barSeed - Barley Seed Development Database

Probe ABC49958

Source Contig ABC49958

barSeed

Links

Affymetrix Source Sequence (715 bp)

>ABC49958 715
CTCGCAGAATGAAAAACAGGGGGCTTATTTTGGTGAGATTAATGGAAGGATTAGATTGTG
CCCAAAATTACCCACCTTAAAAAAGCAACCTATGCGCCAAAAGCTAATCATAAAGCATGA
TAATTTGAAGAAGCTTAGTCTATGGGGCTGTTCAGCAATAGATGCTTTGTATGTGAAATG
CCCAGAGTTGATTGATCTGAACCTCAACTCCTGTACAAATCTACACGCAGAGCGGCTGCT
ACTTCAGTGCCCAAACTTGAAGAATGTACATGCATTTGGATGCCAAGATATGCTGATTGG
TGCAATCAGAAACCAGAAACTGATAAACAGAAAGAATCTAATGAAGCAATGTGTATCAAC
CGGAGTCTAGCAAGGAGTAAGCAGTGAAGCTGAAGGTGTATCAGGCCGTAGTAAGCTTCT
TTAGCTTAGGATTCATACTATTGGAAACAGTGCATCTACATTATTACAGTCTGCCCTGTG
TAGCGTGTAACCTTGTTATAGCCTAAGGTTTTGTAACAACCCCTTATCTCTTATGCACTG
CAAAGCAGTCGCTGTGGACTACCTAAAAAAGTACTCGTATATAGTAGCATACCTCCTAAG
TGCGGATTTTCCGCTGCTGCTGGTGTGTGTGTTAACAATTCAAAAACATCACTTCAAAGT
TGTATTAGTCAGAAAAATAATTGGTATATATACATCGCACGACGAATTATAGCCT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_59859.1	2378	0.0	1257 - 1971	99	714 / 716	CUST_13456_PI390587928 CUST_38861_PI390587928	ABC26079 ABC26631 ABC35374 ABC49958
AK360433	1875	0.0	1226 - 1875	100	650 / 650	CUST_13456_PI390587928	ABC26079 ABC26631 ABC35374 ABC49958
MLOC_59859.5	1912	4e-81	1252 - 1415	100	164 / 164	CUST_13456_PI390587928	ABC26079 ABC26631 ABC35374 ABC49958
AK362685	2202	0.0	1227 - 1638	100	412 / 412	CUST_13456_PI390587928	ABC26079 ABC26631 ABC35374 ABC49958
MLOC_59859.3	2043	0.0	1257 - 1668	100	412 / 412	CUST_13456_PI390587928	ABC26079 ABC26631 ABC35374 ABC49958
AK357926	2134	1e-165	1371 - 1686	100	316 / 316	CUST_13456_PI390587928 CUST_40448_PI390587928	ABC26079 ABC26631 ABC35374 ABC49958
MLOC_59859.2	1927	1e-165	1257 - 1572	100	316 / 316	CUST_13456_PI390587928 CUST_9023_PI390587928	ABC26079 ABC26631 ABC35374 ABC49958
MLOC_59859.4	1949	1e-165	1257 - 1572	100	316 / 316	CUST_13456_PI390587928 CUST_40448_PI390587928	ABC26079 ABC26631 ABC35374 ABC49958
MLOC_59859.6	1757	6e-75	1496 - 1648	100	153 / 153	CUST_13456_PI390587928 CUST_40448_PI390587928	ABC26079 ABC26631 ABC35374 ABC49958
MLOC_59859.7	1735	6e-75	1496 - 1648	100	153 / 153	CUST_13456_PI390587928 CUST_9023_PI390587928	ABC26079 ABC26631 ABC35374 ABC49958