barSeed - Barley Seed Development Database

Probe ABC49746

Source Contig ABC49746

barSeed

Links

Affymetrix Source Sequence (490 bp)

>ABC49746 490
CTTTTTTTTTGTTGCGAAAAAAGCACATATGGTTGATAGCTTCAGAATAAAGTGGTGGAG
TATAACTAGCTGGCAAATCATTGGACCAATACAAACAGTTGTTTATAATTGTATGCAGAG
TCAAATTACGTTGTTCTCATAACTTTCTTAAATTACGGTGCAGATATTTGGTTCAATACT
TGGAGTTTCAGGTGGATTTGTACTTGGGAAAGAAGGTCCCATGGTGCATACAGGGGCATG
CATTGCCAACTTGCTTGGTCAGGGGGGATCACGCAAGTACCATGTCACATGGAATTGGCT
GAAATATTTCAAGAATGACAGGGATAGGCGAGATTTGATTACATGTGGTGCAGCAGCTGG
AGTGGCAGCCGCATTTCGTGCACCTGTTGGTGGTGTACTCTTTGCTCTGGAGGAAGCAGC
ATCATGGTGGCACCTCTTACCCATCTCAAGCTGTTCATTTGTACCTTAATGTAGATGATA
ATCATGTCAG

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_54762.2	2889	2e-137	1554 - 1827	99	271 / 274	CUST_37804_PI390587928	ABC06783 ABC13494 ABC49746
MLOC_54762.1	3195	2e-137	1870 - 2143	99	271 / 274	CUST_10324_PI390587928 CUST_37804_PI390587928	ABC06783 ABC13494 ABC49746
MLOC_54762.3	2879	3e-136	1556 - 1827	99	269 / 272	CUST_37804_PI390587928	ABC06783 ABC13494 ABC49746
AK366758	2973	1e-90	779 - 1052	89	244 / 275	CUST_35064_PI390587928 CUST_37673_PI390587928	ABC06783 ABC13494 ABC49746
MLOC_55517.9	2786	1e-90	1802 - 2075	89	244 / 275	CUST_35064_PI390587928 CUST_37673_PI390587928	ABC06783 ABC13494 ABC49746
MLOC_55517.4	2864	1e-90	1900 - 2173	89	244 / 275	CUST_37673_PI390587928 CUST_35064_PI390587928	ABC06783 ABC13494 ABC49746
MLOC_55517.6	3701	1e-90	1894 - 2167	89	244 / 275	CUST_35064_PI390587928 CUST_37673_PI390587928	ABC06783 ABC13494 ABC49746
MLOC_55517.5	3201	1e-90	1900 - 2173	89	244 / 275	CUST_35064_PI390587928 CUST_37673_PI390587928	ABC06783 ABC13494 ABC49746
MLOC_55517.8	3709	1e-90	1881 - 2154	89	244 / 275	CUST_37673_PI390587928 CUST_35064_PI390587928	ABC06783 ABC13494 ABC49746