barSeed - Barley Seed Development Database

Probe ABC48945

Source Contig ABC48945

barSeed

Links

Affymetrix Source Sequence (557 bp)

>ABC48945 557
AAAATGTTTTGGAGAAACTAGCCCCCAAGGAATTGTGCAAGCCCTCCCCAAAGGAATCGC
CATTGAGTGTCGGGTTGGTCGCTTTCCCAATAAAAATGGTCCATATGGGATATGGAAGGT
TATATAGGTGGAAGGGAAAAGGCCCCTTTTGCGTTTTGCAAAAAGGCTTTAACCTCCCCT
GCCCGTTTTTAAATGTGGGGAAATGGTGTGTAAACTAAATCCTTCCCATTTATTAATGAA
TGTGCGGAGGGTGTCCTCGGGAGTGATGAAATGGTGAGCATGAATTAAATGGTTGAAATA
GTCCCGGGCTTTGAAAACAAACAATTGCCCATCCCCCCCATCCCCGGCCCTAAGGGGGTT
CATGGTCGTTACTTTCCCAACACGTTCATCAAGGAAAAGCTTGGTTGGGCTCCACCCATG
AGGCTGAATGTACCCCCCTGAATTTTTATAGAATTTTTGAACAATTTTTTAATTCAAAAA
TATTTTCAATTGGGTAAATGATTTCCCCCCAAGAAGCAATGAAAACAATTTTTACCAGTG
AAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_22799.3	1858	0.0	82 - 625	91	497 / 544	CUST_7607_PI390587928	ABC01927 ABC01929 ABC01931 ABC48945
MLOC_22799.5	1876	0.0	54 - 589	90	489 / 544	CUST_7607_PI390587928	ABC01927 ABC01929 ABC01931 ABC48945
MLOC_22799.6	1967	4e-180	1 - 497	90	452 / 505	CUST_7607_PI390587928	ABC01927 ABC01929 ABC01931 ABC48945
MLOC_22799.2	2156	4e-110	82 - 366	92	262 / 285	None	ABC01927 ABC01929 ABC01931 ABC48945
MLOC_22799.4	1915	4e-110	54 - 338	92	262 / 285	CUST_7607_PI390587928	ABC01927 ABC01929 ABC01931 ABC48945
MLOC_22799.1	2113	2e-94	442 - 701	91	236 / 260	CUST_7607_PI390587928	ABC01927 ABC01929 ABC01931 ABC48945
MLOC_22799.14	1816	4e-95	1477 - 1737	91	237 / 261	None	ABC01927 ABC01931 ABC48945
MLOC_22799.10	2060	4e-95	567 - 827	91	237 / 261	CUST_7607_PI390587928	ABC01927 ABC01931 ABC48945
MLOC_22799.9	2188	4e-95	620 - 880	91	237 / 261	None	ABC01927 ABC01931 ABC48945
MLOC_22799.11	2107	4e-95	545 - 805	91	237 / 261	CUST_7607_PI390587928	ABC01927 ABC01931 ABC48945
MLOC_22799.12	1971	4e-95	269 - 529	91	237 / 261	CUST_7607_PI390587928	ABC01927 ABC01931 ABC48945
MLOC_22799.7	1780	2e-94	270 - 529	91	236 / 260	CUST_7607_PI390587928	ABC01927 ABC01929 ABC01931 ABC48945