barSeed - Barley Seed Development Database

Probe ABC47837

Source Contig ABC47837

barSeed

Links

Affymetrix Source Sequence (557 bp)

>ABC47837 557
GCCATCAAGCATAGCATCGCAAGTAGCAGGAAATTACGGTGAGTTTGCCCCAGCAGTAAG
ACCACATCAGCTCAGGGCGTCATGAAAAGCCTAAGAATCGGTTGTTCTCTACCATACATA
GTAGGCCTAGAGGTTGCAGCCAGTCTGCCCTGTAGCTGTATTGCCGGATGGATGGACCGG
TTGCTTACAACACGGTCCAATGGCCTAATGCTTACGTCGAGTTTTTCCAGATTTGTTGCA
CACGGTGGAATCTGGGAGCATCACTCTCCTTGAGTGGAATCACAGTGGCCAGATTATAGA
TCGCACAAGCTGCATGGAAATCCCTGTGCTGGCGGTGCTTGCAAATATTTAAAGCCATTC
AATATGTGATGTAAGGTGCAGGGGAGTATGCACGTCCCCATTGGCAGAGATCCCCGCTTT
TGAACTTTTTGGTTTAAAATTCAGATCTCTCGAGTTCAGTAAAATTCAGTGGTAAAGAAA
GTCATACGATGTACAATTTTTTAGTATAAATCTTTGTTGGAAAAAAATCAGTTAGTTCAG
AAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_75748.4	3129	0.0	1797 - 2338	99	541 / 542	CUST_12375_PI390587928 CUST_17099_PI390587928 CUST_41604_PI390587928	ABC14726 ABC47837
MLOC_75748.6	3422	0.0	1910 - 2425	97	511 / 525	CUST_12375_PI390587928 CUST_17099_PI390587928 CUST_41360_PI390587928 CUST_41604_PI390587928	ABC14726 ABC47837
MLOC_75748.13	1518	0.0	747 - 1201	99	454 / 455	CUST_12375_PI390587928 CUST_17099_PI390587928 CUST_41360_PI390587928	ABC14726 ABC47837
MLOC_75747.1	2150	0.0	1435 - 1875	98	441 / 450	CUST_12375_PI390587928 CUST_17099_PI390587928 CUST_41360_PI390587928	ABC14726 ABC47837
MLOC_75748.9	2461	0.0	1785 - 2225	98	441 / 450	CUST_12375_PI390587928 CUST_17099_PI390587928 CUST_41360_PI390587928 CUST_41604_PI390587928	ABC14726 ABC47837
MLOC_75748.7	3494	6e-79	2389 - 2548	100	160 / 160	CUST_12375_PI390587928 CUST_17099_PI390587928 CUST_41360_PI390587928 CUST_41604_PI390587928	ABC14726 ABC47837
MLOC_75748.17	2803	9e-117	2216 - 2446	99	230 / 231	CUST_12375_PI390587928 CUST_17099_PI390587928 CUST_41360_PI390587928 CUST_41604_PI390587928	ABC14726 ABC47837
MLOC_75748.14	3427	9e-117	2223 - 2453	99	230 / 231	CUST_12375_PI390587928 CUST_17099_PI390587928 CUST_41360_PI390587928 CUST_41604_PI390587928	ABC14726 ABC47837
MLOC_75748.3	1916	6e-79	1623 - 1782	100	160 / 160	CUST_12375_PI390587928 CUST_17099_PI390587928	ABC14726 ABC47837
MLOC_75748.15	3604	9e-117	2377 - 2607	99	230 / 231	CUST_12375_PI390587928 CUST_17099_PI390587928 CUST_41360_PI390587928 CUST_41604_PI390587928	ABC14726 ABC47837
MLOC_75748.2	3468	9e-117	2447 - 2677	99	230 / 231	CUST_12375_PI390587928 CUST_17099_PI390587928 CUST_41604_PI390587928	ABC14726 ABC47837
MLOC_75748.5	3001	9e-117	2380 - 2610	99	230 / 231	CUST_12375_PI390587928 CUST_17099_PI390587928 CUST_41360_PI390587928 CUST_41604_PI390587928	ABC14726 ABC47837
MLOC_75748.11	2649	6e-79	2215 - 2374	100	160 / 160	CUST_12375_PI390587928 CUST_17099_PI390587928 CUST_41360_PI390587928 CUST_41604_PI390587928	ABC14726 ABC47837
MLOC_78078.1	1379	2e-93	1046 - 1277	94	219 / 234	None	ABC14726 ABC47837
MLOC_75748.8	3140	7e-113	1730 - 1950	100	221 / 221	CUST_12375_PI390587928 CUST_17099_PI390587928 CUST_41360_PI390587928 CUST_41604_PI390587928	ABC14726 ABC47837
MLOC_75748.12	3110	3e-101	1744 - 1943	100	200 / 200	CUST_12375_PI390587928 CUST_17099_PI390587928 CUST_41360_PI390587928 CUST_41604_PI390587928	ABC14726 ABC47837
MLOC_75748.16	3575	7e-113	1559 - 1779	100	221 / 221	CUST_12375_PI390587928 CUST_17099_PI390587928 CUST_41360_PI390587928 CUST_41604_PI390587928	ABC14726 ABC47837
MLOC_75748.1	2879	6e-79	2586 - 2745	100	160 / 160	CUST_12375_PI390587928 CUST_17099_PI390587928 CUST_41604_PI390587928	ABC14726 ABC47837
MLOC_78078.2	614	3e-101	393 - 613	97	214 / 221	None	ABC14726 ABC47837
MLOC_75747.3	1229	6e-79	795 - 954	100	160 / 160	CUST_12375_PI390587928 CUST_41360_PI390587928	ABC14726 ABC47837
MLOC_75748.10	2644	6e-79	2249 - 2408	100	160 / 160	CUST_12375_PI390587928 CUST_17099_PI390587928 CUST_41360_PI390587928 CUST_41604_PI390587928	ABC14726 ABC47837