barSeed - Barley Seed Development Database

Probe ABC44874

Source Contig ABC44874

barSeed

Links

Affymetrix Source Sequence (618 bp)

>ABC44874 618
GAGCAACAAGTCTACAGACTACGACCAGTTCAGCTGCCTCAAGTGGTATAACGCATTCTC
CCAGAAGCATAACCAGTTGTTGAAGGTGGAGATCGGCCGGCTCAGGTCTCGCAACCCCAG
CGTGAAGATCATCTATGCAGACTACTATGGCGCCGCCATGGAGTTTGTCAGGAACCCCAA
GAGGAACGGCGTCGACAACCCTCTGGTGGCGTGTTGTGGTGGCAACGGCCCTTATGGCAC
CGGCCATGGGTGCGACCAGAACGCAAAGATTTGCCGCGAACCGTCCAGGTTCGCCAACTG
GGACCAGGTTCACATGACGGAGAAGGCATACAATGTCATCGCCAACGGGGTGCTCAACGG
TCCGTATGCAGACATACCTTTGCTCCATGCTTGCTAGGAGAATTTCCTTTTGAGGCATGA
AGACATGTTTGTTGCAACCAAGATCTGTTTCACGCGCTAGCTTCCTGGAATTTTTATTCA
TGTATCACCATCTCAATTAGTCATGAACCAGTCATCAACCCATGCAATTAATGAGCACAC
AGCCTAGCTGTATTCTGTTTTTGTAGAACTATTGGGTGAAATAAATACATTATGAAGAAC
ACAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_39346.1	1439	0.0	62 - 667	99	604 / 606	CUST_6869_PI390587928 CUST_14436_PI390587928	ABC44874
MLOC_38791.1	1315	3e-151	11 - 495	87	425 / 491	CUST_27763_PI390587928 CUST_32549_PI390587928	ABC44874
MLOC_17841.1	1289	1e-116	20 - 500	82	405 / 491	None	ABC44874
MLOC_39346.2	1144	2e-59	242 - 372	98	130 / 132	CUST_6869_PI390587928 CUST_14436_PI390587928	ABC44874