barSeed - Barley Seed Development Database

Probe ABC44644

Source Contig ABC44644

barSeed

Links

Affymetrix Source Sequence (554 bp)

>ABC44644 554
CCAAAAAAACAACTAAACTGTACTACGCCATGAGAGTCTTGGAAAGTTATGAATTATCTG
AAGGGCGCAATCCTGGTGAGACAGCACTTTCTGATCTACCTGCAATTTTGGCTTGGAGGA
AAGATATGTGTGATAGAATGTCTTTAAGCGAGTCTCAAATTCCTACGGCTCTACTGGAAC
GGCTTTTAGCAGCTGGAAAGAAGGAACATCCTCCTGTATGTGCAATCCTTGGTGGCATTC
TTGGTCAGGAGGTGATCAAGTCTATATCTTGTAAGGGCGACACGATCAAGAGTTTCTTTT
ATTTCGACACAGCTGATGGTAAAGGTGTCATGGAGGACATCCCCCCAACTCCGGTAGAGC
AATTTGCGTGATGCCTAACTCAAATTGGTCATTAATCGCTGGTTATTGTACCCAATCATT
AGAGACGAACAGGCGAACATGTGACAACTCCATTGTAGCGTTGGCACCCGAGTACTGTAT
TGACACTCTTGATCTCCTCCAAACAGTCTCAAAGCTGAAGTCAGCCAGATTTTCATTAAA
AAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_22682.2	806	0.0	319 - 806	100	488 / 488	None	ABC06881 ABC06882 ABC44644
MLOC_22682.1	810	0.0	323 - 810	100	488 / 488	None	ABC06881 ABC06882 ABC44644
AK250954.1	2067	3e-156	1638 - 1951	98	309 / 314	CUST_41269_PI390587928	ABC06881 ABC06882 ABC44644
AK358202	3614	7e-143	3133 - 3563	88	380 / 432	CUST_8873_PI390587928	ABC06881 ABC06882 ABC44644
MLOC_61180.1	505	7e-93	187 - 503	86	274 / 318	None	ABC06881 ABC06882 ABC44644