barSeed - Barley Seed Development Database

Probe ABC06882

Source Contig ABC06882

barSeed

Links

Affymetrix Source Sequence (692 bp)

>ABC06882 692
CTATCTCTGTGCCCTGGAAGGATCTGTCCAAAAAAACAACTAAACTGTACTACGCGATGA
GAGTCTTGGAAAGTTATGAATCATCTGAAGGGCGCGACCCTGGTGAGACATCACTTTCTG
ATCTACCCGCACTTTTGGCTCGGAAGAAGGATATGTGTGATAGAATGTCTTTGGACGAGT
CTAAAGTTCCGACGTCTCTCCTGGAACGGCTTCTAGCAGCTGGGAAAAAGGAACATCCTC
CTGTATGTGCAATCCTTGGTGGCATTCTTGGTCAGGAGGTGATCAAGTCAATATCTTGTA
AGGGCAATCCAATCAAGAATTTCTTTTACTTCGACGCCGCTGATGGTAAAGGGGTCATGG
AGGACATCCCCCCAACTCCTGAAGACTGAATCACGTGATACCTAACTCTCATCCGACATG
GCTCGCTGATAATTGTACCCAATCATCAGAGTCGAACATGTGACAACTCTAGTTCGGTGG
CTGAGGCTGGAAACTCAACTTAGCATTTTAGCGTTTTTGTTGTTGTACTTAGCGTTTTAG
CGATGGCATCATGCTATGACACCTGAGAACTGCATTGAACAGAATTGACATTCTCCTCGG
AACAATTTCAAAGCTGAAGGCAGGCAGGCTATTGAATGGTGAAATGTTTTATTTCTGCTT
GCATTAGTAGTGGTTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK358202	3614	0.0	3106 - 3614	100	509 / 509	CUST_8873_PI390587928	ABC06881 ABC06882 ABC44644
MLOC_61180.1	505	0.0	1 - 504	98	496 / 504	None	ABC06881 ABC06882 ABC44644
MLOC_22682.2	806	8e-153	292 - 749	88	403 / 458	None	ABC06881 ABC06882 ABC44644
MLOC_22682.1	810	8e-153	296 - 753	88	403 / 458	None	ABC06881 ABC06882 ABC44644
AK250954.1	2067	9e-83	1647 - 1995	83	291 / 350	CUST_41269_PI390587928	ABC06881 ABC06882 ABC44644
MLOC_64181.2	1039	3e-82	1 - 166	100	166 / 166	None	ABC06881 ABC06882
MLOC_64181.1	678	3e-82	1 - 166	100	166 / 166	None	ABC06881 ABC06882