barSeed - Barley Seed Development Database

Probe ABC40816

Source Contig ABC40816

barSeed

barSeed Home
List Cluster Sets
List Cell Wall Probes

Links

James Hutton Institute Home
BioSS Home

Affymetrix Source Sequence (399 bp)

>ABC40816 399
TTCCAAGGCCAAGTGGGCCGCCCCCTCCACCTCTTTTTTCCCCAGCCCAGAATCAGAGCC
AGACCCAGCAGCAGCAGCAGCAGTTTCCACAGGCCCCGCAGCAATTTCCAACATCAATTG
GTTTTTTTCCAACACAAGGCATTGGGTTTTTCCATCCGGTTCAAATGCAGCAATCCCCGT
GGGTCCAGCGGCAATGATTACAAAGCACCCGTCAGGTTAAAAAGGTGTCAGTTTCGGCCT
AATTTTGTATATTAAGCAATAATTCCAAAGTGTTAGTTGGCAGGTTTGCAGGCAAAGCAG
GATCATCAATGTTTATGAATCCCAAAGGTTTGTAAAAAAGGTTGGTGGTTTGTGTAATGT
AAAAATGAAAACTTTCCGTTTTCGTTTTGGTATGAGGAG

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK376476	2389	3e-170	1779 - 2177	94	374 / 399	CUST_22574_PI390587928 CUST_6079_PI390587928 CUST_19074_PI390587928	ABC20642 ABC40816
MLOC_55275.1	1680	3e-170	80 - 478	94	374 / 399	CUST_19074_PI390587928	ABC20642 ABC40816