barSeed - Barley Seed Development Database

Probe ABC40333

Source Contig ABC40333

barSeed

Links

Affymetrix Source Sequence (652 bp)

>ABC40333 652
GGGCAGGACAAGGTGTACAAGGACGTGATCGAGCCGCTTGAGAGCGTCAGCATCAACATG
ATCCCCACCACCAAGGAAGACATCCGCGACCTCGGCCCGCCCGACCAGGTCCTTCCTCCG
TGCCACTCCACTCGATCATATGCCTTTTCAGATATATCGAACCCGGTCTACACGGTGCGG
TTTGCTCAGAATATAAATCCGATCTGCTATGTATGATGTGTTGTTTTCTTAAGGTCGCCG
AGGCACTGGTGCGGAAAGTCCTATCTCCGCCCACGCAGAAGACCAAGTTGATTGAGGCGA
AAGAGACCGATATCGATGGAAGAGCTTATTACACTTTCGAGTTCACGGCTCAGGCTCCAA
ATTTCACTAGACACGCGCTTGGTACAATTACCATAGCAAATGGCAAATTTTACACGTTGG
CAACGGGTGCAAACGAGAGGAGATGGGACAAGATGAAGGACAGGCTACATACAATCGTCG
ACTCTTTCAAAATCGAAACAAAAGTGTGAGCGATGTTTGAGGCATTGTGCTGATTTTCTT
TGTTTTTAGTTTGTTCGTTTTTGGAGCTACAGCTGGCGCGAGGTTCAAAAGTAAATGTCG
GGAATACAGATTCTACTGTCTTTTTCTTTTTTTTCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_53079.1	511	0.0	1 - 511	99	509 / 511	CUST_25629_PI390587928 CUST_38384_PI390587928	ABC07522 ABC40333
MLOC_53079.2	947	1e-51	401 - 511	100	111 / 111	CUST_38384_PI390587928	ABC07522 ABC40333
MLOC_53079.3	604	1e-51	398 - 508	100	111 / 111	None	ABC07522 ABC40333
MLOC_53079.4	929	1e-51	383 - 493	100	111 / 111	None	ABC07522 ABC40333
AK365640	984	0.0	501 - 906	97	394 / 406	CUST_38384_PI390587928	ABC07522 ABC40333