barSeed - Barley Seed Development Database

Probe ABC40111

Source Contig ABC40111

barSeed

barSeed Home
List Cluster Sets
List Cell Wall Probes

Links

James Hutton Institute Home
BioSS Home

Affymetrix Source Sequence (396 bp)

>ABC40111 396
CCCAGAGAAAATGTACATTTGGACAAAATATGGCAGCCATTCGAATGCCAATGTTAGTGT
GTTTCCCTTACATGTGCTGACTTGGGACGATCAGCTACACTAGGGAAATAGTTCAGATTT
GGTACCACGTTGGTCGTATCTATTGCCAAGATTGTCAATTTTAGTTGTAGTGTTCTCGCT
TGACGACCAAACAATAGATAAATAGTGTTTGTGTGGCTTGCCCTGAGGTTGAGGTCCTTG
GTTCCTTCTGTAGTAGGTCGTGTATGTATATTTGTGTCGACCTCACTTGCATGCTGCAGG
TTCAGTTCACACGTATGTTCTGGGTTTAATTCGTTTGTTATGTGATATTGCTGGAACAAA
CTTTTCATAGGTTTATACTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_78605.2	2814	0.0	1831 - 2210	100	380 / 380	CUST_19864_PI390587928 CUST_26232_PI390587928	ABC40111
MLOC_78604.1	2494	0.0	1988 - 2367	100	380 / 380	CUST_19864_PI390587928 CUST_26232_PI390587928	ABC40111