barSeed - Barley Seed Development Database

Probe ABC39227

Source Contig ABC39227

barSeed

barSeed Home
List Cluster Sets
List Cell Wall Probes

Links

James Hutton Institute Home
BioSS Home

Affymetrix Source Sequence (488 bp)

>ABC39227 488
GCCCCCCAAAAAGGGTTTTGCTGTTCAGCGCCCTCGCCCCAAAACCCTGACAGCTGTTCA
TAATGGTATCTTGGAGGATGTTGTGTACCCACCTTAAATTGTGGGGAAGCGCGTCAGGTC
CCGTTTGGATGGTGCCAAGGTCATCAAGATTTTCTTGGGCCCAAAGGAGGGCACCAACCC
TGAATACAAGCTGGAGACCTTTTTTGCAGTTTACCCCAGGCTTTGCGGGAAAAACGTTGT
CTTTGAGTACCCTGTGGCCGAAACCGCATGAAGACCAAAGCCTTGAATGTCTCCCTTTCA
AATTTTCGGATCCAAAAGTTTTGGTTGATGCTTCAGTTAGTTGGGCTATCAATGTATTCC
AAAAACATAGTTTTGTTAACAACCTGGGTTTAGGAAAGTTTTATGGAGATGGCAATGAAC
GTGAACAATGTTAAAGTTTTGAGCCTTTAAATTATGAACGTCTGGTCGGTTAAAAAAAAA
AAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_55595.1	667	1e-174	1 - 425	93	394 / 425	None	ABC01668 ABC01669 ABC39227
MLOC_55595.2	932	1e-165	1 - 409	92	378 / 409	None	ABC01668 ABC01669 ABC01671 ABC39227