barSeed - Barley Seed Development Database

Probe ABC01671

Source Contig ABC01671

barSeed

Links

Affymetrix Source Sequence (676 bp)

>ABC01671 676
GGTCGCTCTTGAGCTCCTGGTTGCCATTCTCCAGGTCAAAGAAAGCCTGCGCGACGGTGT
CCTCGAACTCCGAGGGCTCGACGCCCTTGTCCTTCTGGATCTTCTTCCTGGCGGTGTACA
TCTTGCTTCCCTTTCGCTGGACCCTGCGCCAACGCGTGGTACGCCGGCGGGGACCCGTCT
TTCCCGACGGAGATCGCCGACCTCTGCGAGGGCATCTACGGCACCGGCGGCGGCGGCGCG
TACACGGGGCAGCTGCTCACCGACGGCCGGTCCGGCGCGTCCTACAACCTGAACGGCGTC
GGCGGGCGCCGGTTCCTGGTGCAGTGGGTCTGGGACCCCTACCGCAGCTACTGCTCCGGC
CCCAACGCGCTCGACCACCACTAGCTTTTCGTTTCTCTTTCACCATCGTCGCCGCATCTA
GCGCTAGCGGTCGTCGTAGTATTCCTCCAACTCCAGCATAGCATTGGATTCCTTCCTCGG
GACATCCATGGCCGGTCCTCCTGTATAGAGTTCCGAAGCATGGTGGTCCGGTCGCCGGTC
AGTGAGCTCATGATTTGCTGACGATGTTTTGGGCTTTCATTCAAATTCGATGTCATTTTG
TGCATCTGGATAACATTTGAAGCATCGGGAGTACCAATTATTGGGAATCTGGATGAAAAA
AAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK355873	3244	0.0	988 - 1520	99	530 / 534	CUST_25206_PI390587928	ABC01671 ABC04437 ABC04438 ABC08937
MLOC_52740.3	1476	0.0	789 - 1301	99	513 / 514	CUST_25206_PI390587928	ABC01671
MLOC_52740.2	1729	0.0	1042 - 1554	99	513 / 514	CUST_25206_PI390587928	ABC01671
MLOC_52740.1	1286	0.0	820 - 1286	99	467 / 468	None	ABC01671
MLOC_55595.2	932	9e-73	597 - 745	100	149 / 149	None	ABC01668 ABC01669 ABC01671 ABC39227